Experiment: Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fliF and fliE are separated by 51 nucleotides fliE and flgC are separated by 14 nucleotides flgC and flgB overlap by 1 nucleotides flgB and DVU0318 are separated by 638 nucleotides
DVU0313: fliF - flagellar M-ring protein FliF (TIGR), at 357,946 to 359,562
fliF
DVU0314: fliE - flagellar basal body component FliE (TIGR), at 359,614 to 359,949
fliE
DVU0315: flgC - flagellar basal-body rod protein FlgC (TIGR), at 359,964 to 360,401
flgC
DVU0316: flgB - flagellar basal-body rod protein FlgB (TIGR), at 360,401 to 360,811
flgB
DVU0318: DVU0318 - TPR domain protein (TIGR), at 361,450 to 362,013
DVU0318
Position (kb) 360
361 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 359.414 kb on - strand at 359.584 kb on + strand at 359.587 kb on - strand at 359.654 kb on + strand, within fliE at 359.667 kb on + strand, within fliE at 359.674 kb on + strand, within fliE at 359.685 kb on + strand, within fliE at 359.685 kb on + strand, within fliE at 359.708 kb on - strand, within fliE at 359.756 kb on + strand, within fliE at 359.915 kb on + strand, within fliE at 359.999 kb on - strand at 360.016 kb on + strand, within flgC at 360.024 kb on - strand, within flgC at 360.031 kb on - strand, within flgC at 360.057 kb on - strand, within flgC at 360.084 kb on - strand, within flgC at 360.150 kb on - strand, within flgC at 360.187 kb on - strand, within flgC at 360.189 kb on + strand, within flgC at 360.202 kb on - strand, within flgC at 360.219 kb on - strand, within flgC at 360.219 kb on - strand, within flgC at 360.285 kb on + strand, within flgC at 360.304 kb on + strand, within flgC at 360.304 kb on + strand, within flgC at 360.312 kb on - strand, within flgC at 360.334 kb on + strand, within flgC at 360.396 kb on - strand at 360.486 kb on - strand, within flgB at 360.525 kb on - strand, within flgB at 360.650 kb on + strand, within flgB at 360.652 kb on - strand, within flgB at 360.834 kb on + strand at 360.979 kb on + strand at 361.005 kb on + strand at 361.011 kb on + strand at 361.013 kb on - strand at 361.135 kb on + strand at 361.145 kb on + strand at 361.210 kb on + strand at 361.218 kb on - strand at 361.416 kb on + strand at 361.417 kb on + strand at 361.497 kb on - strand at 361.718 kb on - strand, within DVU0318 at 361.771 kb on - strand, within DVU0318
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract remove 359,414 - +3.6 359,584 + +1.7 359,587 - -0.2 359,654 + fliE DVU0314 0.12 +2.9 359,667 + fliE DVU0314 0.16 +3.5 359,674 + fliE DVU0314 0.18 +3.2 359,685 + fliE DVU0314 0.21 +3.4 359,685 + fliE DVU0314 0.21 +3.1 359,708 - fliE DVU0314 0.28 +3.7 359,756 + fliE DVU0314 0.42 +2.5 359,915 + fliE DVU0314 0.90 +3.3 359,999 - +2.1 360,016 + flgC DVU0315 0.12 +3.1 360,024 - flgC DVU0315 0.14 +2.4 360,031 - flgC DVU0315 0.15 +3.2 360,057 - flgC DVU0315 0.21 +3.0 360,084 - flgC DVU0315 0.27 +2.9 360,150 - flgC DVU0315 0.42 +4.0 360,187 - flgC DVU0315 0.51 +3.9 360,189 + flgC DVU0315 0.51 +3.3 360,202 - flgC DVU0315 0.54 +3.2 360,219 - flgC DVU0315 0.58 +3.4 360,219 - flgC DVU0315 0.58 +3.5 360,285 + flgC DVU0315 0.73 +3.3 360,304 + flgC DVU0315 0.78 +3.5 360,304 + flgC DVU0315 0.78 +3.0 360,312 - flgC DVU0315 0.79 +3.1 360,334 + flgC DVU0315 0.84 +3.5 360,396 - +3.5 360,486 - flgB DVU0316 0.21 +3.1 360,525 - flgB DVU0316 0.30 +2.8 360,650 + flgB DVU0316 0.61 +2.6 360,652 - flgB DVU0316 0.61 +3.5 360,834 + +1.2 360,979 + +1.0 361,005 + +0.8 361,011 + -0.7 361,013 - -0.5 361,135 + +0.2 361,145 + +0.6 361,210 + -0.8 361,218 - +0.8 361,416 + +0.2 361,417 + -1.2 361,497 - +2.5 361,718 - DVU0318 0.48 +3.8 361,771 - DVU0318 0.57 +1.8
Or see this region's nucleotide sequence