Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_814 and HP15_815 are separated by 9 nucleotides HP15_815 and HP15_816 overlap by 8 nucleotides HP15_816 and HP15_817 are separated by 7 nucleotides HP15_817 and HP15_818 are separated by 256 nucleotides
HP15_814: HP15_814 - aspartate aminotransferase, at 833,311 to 834,561
_814
HP15_815: HP15_815 - uncharacterized conserved protein UCP037225-like protein, at 834,571 to 834,762
_815
HP15_816: HP15_816 - secreted protein containing DUF1439, at 834,755 to 835,327
_816
HP15_817: HP15_817 - 3-isopropylmalate dehydrogenase, at 835,335 to 836,489
_817
HP15_818: HP15_818 - protein containing diguanylate phosphodiesterase, predicted domains, at 836,746 to 837,453
_818
Position (kb) 835
836
837 Strain fitness (log2 ratio) -2
-1
0
1 at 834.369 kb on + strand, within HP15_814 at 834.389 kb on + strand, within HP15_814 at 834.389 kb on + strand, within HP15_814 at 834.397 kb on - strand, within HP15_814 at 834.402 kb on - strand, within HP15_814 at 834.528 kb on + strand at 834.563 kb on - strand at 834.602 kb on - strand, within HP15_815 at 834.934 kb on + strand, within HP15_816 at 834.951 kb on + strand, within HP15_816 at 834.963 kb on + strand, within HP15_816 at 835.045 kb on - strand, within HP15_816 at 835.057 kb on + strand, within HP15_816 at 835.065 kb on - strand, within HP15_816 at 835.119 kb on - strand, within HP15_816 at 835.139 kb on - strand, within HP15_816 at 835.166 kb on + strand, within HP15_816 at 835.431 kb on - strand at 835.511 kb on - strand, within HP15_817 at 835.612 kb on - strand, within HP15_817 at 835.616 kb on - strand, within HP15_817 at 835.702 kb on + strand, within HP15_817 at 835.846 kb on + strand, within HP15_817 at 836.174 kb on - strand, within HP15_817 at 836.266 kb on + strand, within HP15_817 at 836.305 kb on - strand, within HP15_817 at 836.405 kb on - strand at 836.459 kb on + strand at 836.467 kb on - strand at 836.493 kb on + strand at 836.808 kb on + strand at 836.943 kb on - strand, within HP15_818 at 836.992 kb on + strand, within HP15_818 at 836.993 kb on - strand, within HP15_818 at 837.030 kb on + strand, within HP15_818 at 837.090 kb on - strand, within HP15_818 at 837.136 kb on - strand, within HP15_818 at 837.209 kb on - strand, within HP15_818 at 837.243 kb on - strand, within HP15_818 at 837.321 kb on + strand, within HP15_818 at 837.393 kb on + strand at 837.481 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 834,369 + HP15_814 0.85 -0.9 834,389 + HP15_814 0.86 +0.5 834,389 + HP15_814 0.86 +0.1 834,397 - HP15_814 0.87 -0.0 834,402 - HP15_814 0.87 +0.3 834,528 + -0.5 834,563 - -0.6 834,602 - HP15_815 0.16 -0.3 834,934 + HP15_816 0.31 +0.0 834,951 + HP15_816 0.34 -0.1 834,963 + HP15_816 0.36 +0.1 835,045 - HP15_816 0.51 -0.1 835,057 + HP15_816 0.53 +0.4 835,065 - HP15_816 0.54 -0.1 835,119 - HP15_816 0.64 +0.1 835,139 - HP15_816 0.67 -0.2 835,166 + HP15_816 0.72 +0.5 835,431 - +1.1 835,511 - HP15_817 0.15 +0.9 835,612 - HP15_817 0.24 +1.7 835,616 - HP15_817 0.24 +0.3 835,702 + HP15_817 0.32 +0.0 835,846 + HP15_817 0.44 -2.6 836,174 - HP15_817 0.73 +0.8 836,266 + HP15_817 0.81 -0.2 836,305 - HP15_817 0.84 +1.1 836,405 - +0.6 836,459 + -0.0 836,467 - -0.6 836,493 + -0.0 836,808 + +0.5 836,943 - HP15_818 0.28 +0.1 836,992 + HP15_818 0.35 -0.1 836,993 - HP15_818 0.35 -0.0 837,030 + HP15_818 0.40 -0.0 837,090 - HP15_818 0.49 +0.0 837,136 - HP15_818 0.55 -0.2 837,209 - HP15_818 0.65 +0.3 837,243 - HP15_818 0.70 -0.6 837,321 + HP15_818 0.81 -1.0 837,393 + +0.4 837,481 - -1.2
Or see this region's nucleotide sequence