Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p42g5 and HP15_p42g6 are separated by 121 nucleotides HP15_p42g6 and HP15_p42g7 are separated by 40 nucleotides HP15_p42g7 and HP15_p42g8 overlap by 8 nucleotides HP15_p42g8 and HP15_p42g9 are separated by 106 nucleotides HP15_p42g9 and HP15_p42g10 are separated by 132 nucleotides
HP15_p42g5: HP15_p42g5 - conserved hypothetical protein, at 3,973 to 4,269
_p42g5
HP15_p42g6: HP15_p42g6 - antirestriction protein, at 4,391 to 4,825
_p42g6
HP15_p42g7: HP15_p42g7 - klcB-like protein, at 4,866 to 5,933
_p42g7
HP15_p42g8: HP15_p42g8 - transcriptional repressor korC-like protein, at 5,926 to 6,180
_p42g8
HP15_p42g9: HP15_p42g9 - kleC-like protein, at 6,287 to 6,568
_p42g9
HP15_p42g10: HP15_p42g10 - KleE protein, at 6,701 to 7,051
_p42g10
Position (kb) 4
5
6 Strain fitness (log2 ratio) -2
-1
0
1
2 at 3.926 kb on + strand at 4.058 kb on + strand, within HP15_p42g5 at 4.071 kb on + strand, within HP15_p42g5 at 4.079 kb on - strand, within HP15_p42g5 at 4.082 kb on + strand, within HP15_p42g5 at 4.114 kb on + strand, within HP15_p42g5 at 4.114 kb on + strand, within HP15_p42g5 at 4.122 kb on - strand, within HP15_p42g5 at 4.158 kb on + strand, within HP15_p42g5 at 4.166 kb on + strand, within HP15_p42g5 at 4.368 kb on + strand at 4.439 kb on + strand, within HP15_p42g6 at 4.497 kb on + strand, within HP15_p42g6 at 4.521 kb on - strand, within HP15_p42g6 at 4.540 kb on + strand, within HP15_p42g6 at 4.561 kb on + strand, within HP15_p42g6 at 4.563 kb on + strand, within HP15_p42g6 at 4.563 kb on + strand, within HP15_p42g6 at 4.563 kb on + strand, within HP15_p42g6 at 4.569 kb on - strand, within HP15_p42g6 at 4.569 kb on - strand, within HP15_p42g6 at 4.569 kb on - strand, within HP15_p42g6 at 4.569 kb on - strand, within HP15_p42g6 at 4.571 kb on - strand, within HP15_p42g6 at 4.571 kb on - strand, within HP15_p42g6 at 4.713 kb on - strand, within HP15_p42g6 at 4.718 kb on + strand, within HP15_p42g6 at 4.720 kb on - strand, within HP15_p42g6 at 4.723 kb on + strand, within HP15_p42g6 at 4.723 kb on + strand, within HP15_p42g6 at 4.726 kb on - strand, within HP15_p42g6 at 4.726 kb on - strand, within HP15_p42g6 at 4.772 kb on + strand, within HP15_p42g6 at 4.779 kb on + strand, within HP15_p42g6 at 4.779 kb on + strand, within HP15_p42g6 at 4.972 kb on + strand at 4.972 kb on + strand at 4.972 kb on + strand at 4.977 kb on + strand, within HP15_p42g7 at 4.980 kb on - strand, within HP15_p42g7 at 5.245 kb on + strand, within HP15_p42g7 at 5.322 kb on + strand, within HP15_p42g7 at 5.330 kb on - strand, within HP15_p42g7 at 5.330 kb on - strand, within HP15_p42g7 at 5.386 kb on - strand, within HP15_p42g7 at 5.464 kb on - strand, within HP15_p42g7 at 5.477 kb on - strand, within HP15_p42g7 at 5.478 kb on - strand, within HP15_p42g7 at 5.478 kb on - strand, within HP15_p42g7 at 5.495 kb on - strand, within HP15_p42g7 at 5.496 kb on + strand, within HP15_p42g7 at 5.516 kb on - strand, within HP15_p42g7 at 5.641 kb on - strand, within HP15_p42g7 at 5.641 kb on - strand, within HP15_p42g7 at 5.675 kb on + strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.683 kb on - strand, within HP15_p42g7 at 5.732 kb on + strand, within HP15_p42g7 at 5.740 kb on - strand, within HP15_p42g7 at 5.768 kb on + strand, within HP15_p42g7 at 5.776 kb on + strand, within HP15_p42g7 at 5.784 kb on - strand, within HP15_p42g7 at 5.784 kb on - strand, within HP15_p42g7 at 5.805 kb on - strand, within HP15_p42g7 at 5.831 kb on - strand at 5.852 kb on - strand at 5.863 kb on - strand at 5.881 kb on + strand at 5.881 kb on - strand at 5.882 kb on - strand at 5.909 kb on - strand at 6.182 kb on - strand at 6.313 kb on - strand at 6.319 kb on - strand, within HP15_p42g9 at 6.442 kb on - strand, within HP15_p42g9 at 6.700 kb on - strand at 6.781 kb on + strand, within HP15_p42g10 at 6.880 kb on - strand, within HP15_p42g10
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 3,926 + +0.7 4,058 + HP15_p42g5 0.29 -0.3 4,071 + HP15_p42g5 0.33 -0.1 4,079 - HP15_p42g5 0.36 -0.9 4,082 + HP15_p42g5 0.37 +0.3 4,114 + HP15_p42g5 0.47 +0.1 4,114 + HP15_p42g5 0.47 -1.3 4,122 - HP15_p42g5 0.50 +0.4 4,158 + HP15_p42g5 0.62 +0.3 4,166 + HP15_p42g5 0.65 +0.1 4,368 + -0.5 4,439 + HP15_p42g6 0.11 -0.5 4,497 + HP15_p42g6 0.24 -0.4 4,521 - HP15_p42g6 0.30 -0.3 4,540 + HP15_p42g6 0.34 +0.7 4,561 + HP15_p42g6 0.39 +0.1 4,563 + HP15_p42g6 0.40 +0.5 4,563 + HP15_p42g6 0.40 -2.0 4,563 + HP15_p42g6 0.40 -1.2 4,569 - HP15_p42g6 0.41 -0.0 4,569 - HP15_p42g6 0.41 -0.4 4,569 - HP15_p42g6 0.41 +0.8 4,569 - HP15_p42g6 0.41 +0.1 4,571 - HP15_p42g6 0.41 +1.3 4,571 - HP15_p42g6 0.41 -0.1 4,713 - HP15_p42g6 0.74 +0.3 4,718 + HP15_p42g6 0.75 -0.1 4,720 - HP15_p42g6 0.76 -0.0 4,723 + HP15_p42g6 0.76 -1.5 4,723 + HP15_p42g6 0.76 -0.9 4,726 - HP15_p42g6 0.77 +0.6 4,726 - HP15_p42g6 0.77 -0.7 4,772 + HP15_p42g6 0.88 -1.8 4,779 + HP15_p42g6 0.89 -1.8 4,779 + HP15_p42g6 0.89 -2.1 4,972 + -1.6 4,972 + -0.9 4,972 + -1.5 4,977 + HP15_p42g7 0.10 -1.2 4,980 - HP15_p42g7 0.11 -1.0 5,245 + HP15_p42g7 0.35 -2.0 5,322 + HP15_p42g7 0.43 -0.5 5,330 - HP15_p42g7 0.43 -1.5 5,330 - HP15_p42g7 0.43 +0.6 5,386 - HP15_p42g7 0.49 -0.1 5,464 - HP15_p42g7 0.56 +0.2 5,477 - HP15_p42g7 0.57 -0.4 5,478 - HP15_p42g7 0.57 -0.1 5,478 - HP15_p42g7 0.57 -0.7 5,495 - HP15_p42g7 0.59 -0.2 5,496 + HP15_p42g7 0.59 -1.7 5,516 - HP15_p42g7 0.61 -0.4 5,641 - HP15_p42g7 0.73 -1.6 5,641 - HP15_p42g7 0.73 -0.3 5,675 + HP15_p42g7 0.76 -1.5 5,683 - HP15_p42g7 0.76 +2.2 5,683 - HP15_p42g7 0.76 -0.3 5,683 - HP15_p42g7 0.76 -0.2 5,683 - HP15_p42g7 0.76 -1.3 5,683 - HP15_p42g7 0.76 -0.2 5,683 - HP15_p42g7 0.76 +0.0 5,683 - HP15_p42g7 0.76 +0.4 5,683 - HP15_p42g7 0.76 -0.4 5,732 + HP15_p42g7 0.81 -1.2 5,740 - HP15_p42g7 0.82 -0.8 5,768 + HP15_p42g7 0.84 -0.9 5,776 + HP15_p42g7 0.85 +0.1 5,784 - HP15_p42g7 0.86 -1.2 5,784 - HP15_p42g7 0.86 +0.1 5,805 - HP15_p42g7 0.88 -0.2 5,831 - +0.3 5,852 - -0.4 5,863 - -1.7 5,881 + -2.6 5,881 - -0.5 5,882 - -2.3 5,909 - +0.8 6,182 - -1.2 6,313 - +0.3 6,319 - HP15_p42g9 0.11 +0.7 6,442 - HP15_p42g9 0.55 -0.0 6,700 - -0.5 6,781 + HP15_p42g10 0.23 -1.5 6,880 - HP15_p42g10 0.51 -0.5
Or see this region's nucleotide sequence