Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2960 and HP15_2961 overlap by 14 nucleotides HP15_2961 and HP15_2962 are separated by 96 nucleotides
HP15_2960: HP15_2960 - two-component sensor, at 3,104,467 to 3,105,933
_2960
HP15_2961: HP15_2961 - two component transcriptional regulator, winged helix family, at 3,105,920 to 3,106,660
_2961
HP15_2962: HP15_2962 - conserved hypothetical protein, secreted, at 3,106,757 to 3,108,001
_2962
Position (kb)
3105
3106
3107 Strain fitness (log2 ratio)
-1
0
1
2 at 3104.929 kb on - strand, within HP15_2960 at 3105.035 kb on + strand, within HP15_2960 at 3105.118 kb on - strand, within HP15_2960 at 3105.124 kb on + strand, within HP15_2960 at 3105.351 kb on + strand, within HP15_2960 at 3105.371 kb on - strand, within HP15_2960 at 3105.407 kb on - strand, within HP15_2960 at 3105.417 kb on + strand, within HP15_2960 at 3105.429 kb on + strand, within HP15_2960 at 3105.448 kb on - strand, within HP15_2960 at 3105.469 kb on - strand, within HP15_2960 at 3105.542 kb on + strand, within HP15_2960 at 3105.542 kb on + strand, within HP15_2960 at 3105.542 kb on + strand, within HP15_2960 at 3105.863 kb on - strand at 3105.975 kb on + strand at 3105.983 kb on - strand at 3105.999 kb on - strand, within HP15_2961 at 3106.006 kb on - strand, within HP15_2961 at 3106.084 kb on + strand, within HP15_2961 at 3106.097 kb on - strand, within HP15_2961 at 3106.103 kb on + strand, within HP15_2961 at 3106.125 kb on + strand, within HP15_2961 at 3106.155 kb on + strand, within HP15_2961 at 3106.168 kb on - strand, within HP15_2961 at 3106.264 kb on + strand, within HP15_2961 at 3106.272 kb on - strand, within HP15_2961 at 3106.303 kb on - strand, within HP15_2961 at 3106.313 kb on + strand, within HP15_2961 at 3106.344 kb on + strand, within HP15_2961 at 3106.462 kb on + strand, within HP15_2961 at 3106.544 kb on - strand, within HP15_2961 at 3106.567 kb on - strand, within HP15_2961 at 3106.637 kb on + strand at 3106.726 kb on - strand at 3106.834 kb on + strand at 3106.835 kb on + strand at 3106.842 kb on - strand at 3106.973 kb on + strand, within HP15_2962 at 3106.973 kb on + strand, within HP15_2962 at 3107.081 kb on - strand, within HP15_2962 at 3107.191 kb on - strand, within HP15_2962 at 3107.217 kb on + strand, within HP15_2962 at 3107.239 kb on + strand, within HP15_2962 at 3107.239 kb on + strand, within HP15_2962 at 3107.247 kb on - strand, within HP15_2962 at 3107.247 kb on - strand, within HP15_2962 at 3107.254 kb on + strand, within HP15_2962 at 3107.272 kb on - strand, within HP15_2962 at 3107.317 kb on - strand, within HP15_2962 at 3107.321 kb on + strand, within HP15_2962 at 3107.356 kb on + strand, within HP15_2962 at 3107.361 kb on + strand, within HP15_2962 at 3107.361 kb on + strand, within HP15_2962 at 3107.369 kb on - strand, within HP15_2962 at 3107.369 kb on - strand, within HP15_2962 at 3107.369 kb on - strand, within HP15_2962 at 3107.369 kb on - strand, within HP15_2962 at 3107.369 kb on - strand, within HP15_2962 at 3107.411 kb on + strand, within HP15_2962 at 3107.433 kb on + strand, within HP15_2962 at 3107.552 kb on + strand, within HP15_2962 at 3107.584 kb on - strand, within HP15_2962
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 3,104,929 - HP15_2960 0.31 -1.6 3,105,035 + HP15_2960 0.39 +1.0 3,105,118 - HP15_2960 0.44 +1.0 3,105,124 + HP15_2960 0.45 +0.4 3,105,351 + HP15_2960 0.60 -0.1 3,105,371 - HP15_2960 0.62 +1.1 3,105,407 - HP15_2960 0.64 +1.4 3,105,417 + HP15_2960 0.65 -0.2 3,105,429 + HP15_2960 0.66 +0.1 3,105,448 - HP15_2960 0.67 +0.2 3,105,469 - HP15_2960 0.68 +0.1 3,105,542 + HP15_2960 0.73 -0.5 3,105,542 + HP15_2960 0.73 +0.0 3,105,542 + HP15_2960 0.73 +0.0 3,105,863 - +0.5 3,105,975 + +0.0 3,105,983 - +1.1 3,105,999 - HP15_2961 0.11 +0.2 3,106,006 - HP15_2961 0.12 -0.7 3,106,084 + HP15_2961 0.22 -0.7 3,106,097 - HP15_2961 0.24 -0.6 3,106,103 + HP15_2961 0.25 -0.5 3,106,125 + HP15_2961 0.28 +0.0 3,106,155 + HP15_2961 0.32 +0.7 3,106,168 - HP15_2961 0.33 +1.7 3,106,264 + HP15_2961 0.46 +2.5 3,106,272 - HP15_2961 0.48 +0.1 3,106,303 - HP15_2961 0.52 +0.5 3,106,313 + HP15_2961 0.53 -1.3 3,106,344 + HP15_2961 0.57 -1.2 3,106,462 + HP15_2961 0.73 +0.2 3,106,544 - HP15_2961 0.84 -0.7 3,106,567 - HP15_2961 0.87 +0.0 3,106,637 + -0.4 3,106,726 - +0.6 3,106,834 + +0.7 3,106,835 + +0.6 3,106,842 - -0.2 3,106,973 + HP15_2962 0.17 +1.9 3,106,973 + HP15_2962 0.17 +0.2 3,107,081 - HP15_2962 0.26 +0.3 3,107,191 - HP15_2962 0.35 +0.7 3,107,217 + HP15_2962 0.37 +0.3 3,107,239 + HP15_2962 0.39 -0.2 3,107,239 + HP15_2962 0.39 +0.0 3,107,247 - HP15_2962 0.39 +1.0 3,107,247 - HP15_2962 0.39 -0.0 3,107,254 + HP15_2962 0.40 +0.5 3,107,272 - HP15_2962 0.41 +0.0 3,107,317 - HP15_2962 0.45 -0.1 3,107,321 + HP15_2962 0.45 +0.2 3,107,356 + HP15_2962 0.48 -1.0 3,107,361 + HP15_2962 0.49 +0.5 3,107,361 + HP15_2962 0.49 +0.8 3,107,369 - HP15_2962 0.49 -0.5 3,107,369 - HP15_2962 0.49 +0.2 3,107,369 - HP15_2962 0.49 +1.9 3,107,369 - HP15_2962 0.49 +0.1 3,107,369 - HP15_2962 0.49 +0.6 3,107,411 + HP15_2962 0.53 +0.6 3,107,433 + HP15_2962 0.54 +0.0 3,107,552 + HP15_2962 0.64 +0.9 3,107,584 - HP15_2962 0.66 -1.2
Or see this region's nucleotide sequence