Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2836 and HP15_2837 are separated by 238 nucleotides HP15_2837 and HP15_2838 are separated by 228 nucleotides HP15_2838 and HP15_2839 are separated by 27 nucleotides HP15_2839 and HP15_2840 are separated by 134 nucleotides
HP15_2836: HP15_2836 - conserved hypothetical protein, membrane, at 2,978,752 to 2,979,126
_2836
HP15_2837: HP15_2837 - conserved hypothetical protein, at 2,979,365 to 2,979,586
_2837
HP15_2838: HP15_2838 - oxidoreductase, short chain dehydrogenase/reductase family-like protein, at 2,979,815 to 2,980,588
_2838
HP15_2839: HP15_2839 - protein containing transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal domain, at 2,980,616 to 2,981,263
_2839
HP15_2840: HP15_2840 - conserved hypothetical protein, secreted, at 2,981,398 to 2,982,681
_2840
Position (kb)
2979
2980
2981 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2978.859 kb on + strand, within HP15_2836 at 2978.867 kb on - strand, within HP15_2836 at 2978.883 kb on - strand, within HP15_2836 at 2978.962 kb on + strand, within HP15_2836 at 2978.994 kb on - strand, within HP15_2836 at 2979.211 kb on - strand at 2979.278 kb on + strand at 2979.313 kb on - strand at 2979.366 kb on - strand at 2979.470 kb on + strand, within HP15_2837 at 2979.515 kb on + strand, within HP15_2837 at 2979.523 kb on - strand, within HP15_2837 at 2979.671 kb on + strand at 2979.671 kb on + strand at 2979.683 kb on + strand at 2979.702 kb on - strand at 2979.704 kb on + strand at 2979.830 kb on - strand at 2979.945 kb on - strand, within HP15_2838 at 2980.237 kb on + strand, within HP15_2838 at 2980.249 kb on + strand, within HP15_2838 at 2980.331 kb on + strand, within HP15_2838 at 2980.346 kb on - strand, within HP15_2838 at 2980.388 kb on - strand, within HP15_2838 at 2980.507 kb on + strand, within HP15_2838 at 2980.527 kb on + strand at 2980.538 kb on + strand at 2980.546 kb on - strand at 2980.577 kb on + strand at 2980.582 kb on + strand at 2980.590 kb on - strand at 2980.693 kb on - strand, within HP15_2839 at 2980.740 kb on + strand, within HP15_2839 at 2980.748 kb on - strand, within HP15_2839 at 2980.817 kb on - strand, within HP15_2839 at 2980.867 kb on + strand, within HP15_2839 at 2980.955 kb on - strand, within HP15_2839 at 2981.141 kb on - strand, within HP15_2839 at 2981.177 kb on + strand, within HP15_2839 at 2981.211 kb on + strand at 2981.219 kb on - strand at 2981.221 kb on - strand at 2981.221 kb on - strand at 2981.231 kb on + strand at 2981.349 kb on - strand at 2981.356 kb on + strand at 2981.362 kb on + strand at 2981.368 kb on + strand at 2981.382 kb on - strand at 2981.382 kb on - strand at 2981.428 kb on + strand at 2981.538 kb on + strand, within HP15_2840 at 2981.545 kb on - strand, within HP15_2840 at 2981.575 kb on + strand, within HP15_2840
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 2,978,859 + HP15_2836 0.29 +1.0 2,978,867 - HP15_2836 0.31 -0.5 2,978,883 - HP15_2836 0.35 +1.1 2,978,962 + HP15_2836 0.56 -0.1 2,978,994 - HP15_2836 0.65 -0.0 2,979,211 - +0.6 2,979,278 + +0.0 2,979,313 - -0.2 2,979,366 - -0.3 2,979,470 + HP15_2837 0.47 -3.5 2,979,515 + HP15_2837 0.68 +0.3 2,979,523 - HP15_2837 0.71 +0.5 2,979,671 + -0.5 2,979,671 + +0.7 2,979,683 + -0.1 2,979,702 - -0.1 2,979,704 + -0.3 2,979,830 - +0.1 2,979,945 - HP15_2838 0.17 -0.0 2,980,237 + HP15_2838 0.55 +0.2 2,980,249 + HP15_2838 0.56 +1.6 2,980,331 + HP15_2838 0.67 +0.3 2,980,346 - HP15_2838 0.69 +1.5 2,980,388 - HP15_2838 0.74 +0.5 2,980,507 + HP15_2838 0.89 -0.5 2,980,527 + +0.6 2,980,538 + +1.4 2,980,546 - -0.1 2,980,577 + -1.2 2,980,582 + -0.3 2,980,590 - +0.4 2,980,693 - HP15_2839 0.12 -0.3 2,980,740 + HP15_2839 0.19 +0.8 2,980,748 - HP15_2839 0.20 +0.0 2,980,817 - HP15_2839 0.31 -0.3 2,980,867 + HP15_2839 0.39 +0.6 2,980,955 - HP15_2839 0.52 -0.5 2,981,141 - HP15_2839 0.81 +0.3 2,981,177 + HP15_2839 0.87 -0.4 2,981,211 + +1.1 2,981,219 - -0.3 2,981,221 - +2.3 2,981,221 - +0.9 2,981,231 + +0.0 2,981,349 - -0.8 2,981,356 + -0.1 2,981,362 + -0.5 2,981,368 + +0.3 2,981,382 - +0.0 2,981,382 - -0.4 2,981,428 + -1.3 2,981,538 + HP15_2840 0.11 +0.7 2,981,545 - HP15_2840 0.11 -0.3 2,981,575 + HP15_2840 0.14 -0.3
Or see this region's nucleotide sequence