Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2320 and HP15_2321 are separated by 24 nucleotides HP15_2321 and HP15_2322 are separated by 122 nucleotides HP15_2322 and HP15_2323 overlap by 1 nucleotides HP15_2323 and HP15_2324 overlap by 20 nucleotides HP15_2324 and HP15_2325 overlap by 4 nucleotides
HP15_2320: HP15_2320 - response regulator receiver protein, at 2,438,918 to 2,440,675
_2320
HP15_2321: HP15_2321 - anti-sigma-factor antagonist, at 2,440,700 to 2,441,005
_2321
HP15_2322: HP15_2322 - flagellar FliJ protein, at 2,441,128 to 2,441,571
_2322
HP15_2323: HP15_2323 - flagellum-specific ATP synthase FliI, at 2,441,571 to 2,442,965
_2323
HP15_2324: HP15_2324 - flagellar assembly protein H, at 2,442,946 to 2,443,842
_2324
HP15_2325: HP15_2325 - flagellar motor switch protein G, at 2,443,839 to 2,444,882
_2325
Position (kb)
2441
2442
2443 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2440.650 kb on - strand at 2440.725 kb on + strand at 2440.742 kb on + strand, within HP15_2321 at 2440.903 kb on + strand, within HP15_2321 at 2441.058 kb on + strand at 2441.066 kb on - strand at 2441.074 kb on + strand at 2441.362 kb on - strand, within HP15_2322 at 2441.388 kb on + strand, within HP15_2322 at 2441.396 kb on - strand, within HP15_2322 at 2441.510 kb on - strand, within HP15_2322 at 2441.529 kb on + strand at 2441.529 kb on + strand at 2441.537 kb on - strand at 2441.545 kb on - strand at 2441.632 kb on - strand at 2441.699 kb on + strand at 2441.818 kb on - strand, within HP15_2323 at 2441.919 kb on + strand, within HP15_2323 at 2442.027 kb on + strand, within HP15_2323 at 2442.033 kb on - strand, within HP15_2323 at 2442.033 kb on - strand, within HP15_2323 at 2442.139 kb on + strand, within HP15_2323 at 2442.147 kb on - strand, within HP15_2323 at 2442.353 kb on + strand, within HP15_2323 at 2442.361 kb on - strand, within HP15_2323 at 2442.391 kb on - strand, within HP15_2323 at 2442.396 kb on + strand, within HP15_2323 at 2442.474 kb on + strand, within HP15_2323 at 2442.493 kb on - strand, within HP15_2323 at 2442.723 kb on - strand, within HP15_2323 at 2442.764 kb on + strand, within HP15_2323 at 2442.801 kb on + strand, within HP15_2323 at 2442.812 kb on + strand, within HP15_2323 at 2442.836 kb on + strand at 2442.844 kb on - strand at 2442.904 kb on - strand at 2442.961 kb on - strand at 2443.080 kb on - strand, within HP15_2324 at 2443.134 kb on - strand, within HP15_2324 at 2443.209 kb on + strand, within HP15_2324 at 2443.281 kb on + strand, within HP15_2324 at 2443.316 kb on + strand, within HP15_2324 at 2443.380 kb on + strand, within HP15_2324 at 2443.380 kb on + strand, within HP15_2324 at 2443.385 kb on + strand, within HP15_2324 at 2443.385 kb on + strand, within HP15_2324 at 2443.402 kb on + strand, within HP15_2324 at 2443.402 kb on + strand, within HP15_2324 at 2443.410 kb on - strand, within HP15_2324 at 2443.415 kb on - strand, within HP15_2324 at 2443.432 kb on + strand, within HP15_2324 at 2443.480 kb on + strand, within HP15_2324 at 2443.502 kb on + strand, within HP15_2324 at 2443.556 kb on + strand, within HP15_2324 at 2443.556 kb on + strand, within HP15_2324 at 2443.557 kb on + strand, within HP15_2324 at 2443.597 kb on + strand, within HP15_2324 at 2443.628 kb on + strand, within HP15_2324 at 2443.650 kb on + strand, within HP15_2324 at 2443.708 kb on - strand, within HP15_2324 at 2443.717 kb on - strand, within HP15_2324 at 2443.870 kb on - strand at 2443.896 kb on - strand at 2443.927 kb on + strand at 2443.955 kb on - strand, within HP15_2325
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 2,440,650 - -1.2 2,440,725 + -0.7 2,440,742 + HP15_2321 0.14 -0.1 2,440,903 + HP15_2321 0.66 +0.7 2,441,058 + -0.5 2,441,066 - -0.2 2,441,074 + +0.2 2,441,362 - HP15_2322 0.53 -0.3 2,441,388 + HP15_2322 0.59 +0.6 2,441,396 - HP15_2322 0.60 +0.4 2,441,510 - HP15_2322 0.86 +0.1 2,441,529 + +1.1 2,441,529 + +0.1 2,441,537 - +0.6 2,441,545 - +0.4 2,441,632 - +0.6 2,441,699 + +0.3 2,441,818 - HP15_2323 0.18 +0.4 2,441,919 + HP15_2323 0.25 +0.4 2,442,027 + HP15_2323 0.33 -0.4 2,442,033 - HP15_2323 0.33 -0.8 2,442,033 - HP15_2323 0.33 +1.7 2,442,139 + HP15_2323 0.41 +0.2 2,442,147 - HP15_2323 0.41 +0.4 2,442,353 + HP15_2323 0.56 +1.3 2,442,361 - HP15_2323 0.57 +2.2 2,442,391 - HP15_2323 0.59 +0.5 2,442,396 + HP15_2323 0.59 +0.1 2,442,474 + HP15_2323 0.65 +0.6 2,442,493 - HP15_2323 0.66 +1.0 2,442,723 - HP15_2323 0.83 +2.2 2,442,764 + HP15_2323 0.86 +0.4 2,442,801 + HP15_2323 0.88 +0.6 2,442,812 + HP15_2323 0.89 -0.0 2,442,836 + +1.1 2,442,844 - +1.2 2,442,904 - +1.0 2,442,961 - +0.8 2,443,080 - HP15_2324 0.15 -1.8 2,443,134 - HP15_2324 0.21 +0.1 2,443,209 + HP15_2324 0.29 -0.1 2,443,281 + HP15_2324 0.37 +0.1 2,443,316 + HP15_2324 0.41 -0.1 2,443,380 + HP15_2324 0.48 -0.2 2,443,380 + HP15_2324 0.48 +0.8 2,443,385 + HP15_2324 0.49 +0.7 2,443,385 + HP15_2324 0.49 +0.9 2,443,402 + HP15_2324 0.51 +0.4 2,443,402 + HP15_2324 0.51 +0.1 2,443,410 - HP15_2324 0.52 +1.1 2,443,415 - HP15_2324 0.52 +0.2 2,443,432 + HP15_2324 0.54 +0.4 2,443,480 + HP15_2324 0.60 +0.0 2,443,502 + HP15_2324 0.62 +0.6 2,443,556 + HP15_2324 0.68 -0.2 2,443,556 + HP15_2324 0.68 +0.7 2,443,557 + HP15_2324 0.68 +0.5 2,443,597 + HP15_2324 0.73 +0.7 2,443,628 + HP15_2324 0.76 +0.6 2,443,650 + HP15_2324 0.78 +0.6 2,443,708 - HP15_2324 0.85 +0.6 2,443,717 - HP15_2324 0.86 +0.5 2,443,870 - -0.6 2,443,896 - -0.1 2,443,927 + +0.4 2,443,955 - HP15_2325 0.11 +0.3
Or see this region's nucleotide sequence