Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1488 and HP15_1489 are separated by 68 nucleotides HP15_1489 and HP15_1490 are separated by 63 nucleotides HP15_1490 and HP15_1491 are separated by 74 nucleotides HP15_1491 and HP15_1492 overlap by 11 nucleotides
HP15_1488: HP15_1488 - cysteine desulfurase IscS, at 1,562,931 to 1,564,079
_1488
HP15_1489: HP15_1489 - nucleoside diphosphate kinase, at 1,564,148 to 1,564,576
_1489
HP15_1490: HP15_1490 - conserved hypothetical protein, at 1,564,640 to 1,565,752
_1490
HP15_1491: HP15_1491 - type IV pilus biogenesis protein PilF, at 1,565,827 to 1,566,600
_1491
HP15_1492: HP15_1492 - conserved hypothetical protein, at 1,566,590 to 1,567,627
_1492
Position (kb) 1564
1565
1566 Strain fitness (log2 ratio) -1
0
1 at 1564.584 kb on + strand at 1565.031 kb on + strand, within HP15_1490 at 1565.084 kb on + strand, within HP15_1490 at 1565.523 kb on + strand, within HP15_1490 at 1565.791 kb on + strand at 1565.951 kb on + strand, within HP15_1491 at 1565.956 kb on + strand, within HP15_1491
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 1,564,584 + -0.4 1,565,031 + HP15_1490 0.35 -0.2 1,565,084 + HP15_1490 0.40 +0.2 1,565,523 + HP15_1490 0.79 +0.4 1,565,791 + -1.7 1,565,951 + HP15_1491 0.16 -0.7 1,565,956 + HP15_1491 0.17 -0.5
Or see this region's nucleotide sequence