Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1220 and HP15_1221 are separated by 56 nucleotides HP15_1221 and HP15_1222 are separated by 19 nucleotides HP15_1222 and HP15_1223 are separated by 24 nucleotides
HP15_1220: HP15_1220 - acetyltransferase, GNAT family, at 1,268,745 to 1,271,489
_1220
HP15_1221: HP15_1221 - recombination-associated protein rdgC, at 1,271,546 to 1,272,472
_1221
HP15_1222: HP15_1222 - conserved hypothetical protein, membrane, at 1,272,492 to 1,272,692
_1222
HP15_1223: HP15_1223 - protein YaaA, at 1,272,717 to 1,273,487
_1223
Position (kb)
1271
1272
1273 Strain fitness (log2 ratio)
-1
0
1
2 at 1270.619 kb on + strand, within HP15_1220 at 1270.668 kb on + strand, within HP15_1220 at 1270.676 kb on - strand, within HP15_1220 at 1270.726 kb on + strand, within HP15_1220 at 1270.748 kb on - strand, within HP15_1220 at 1270.757 kb on + strand, within HP15_1220 at 1270.813 kb on + strand, within HP15_1220 at 1271.174 kb on + strand, within HP15_1220 at 1271.303 kb on + strand at 1271.535 kb on + strand at 1271.551 kb on - strand at 1271.586 kb on + strand at 1271.597 kb on - strand at 1271.617 kb on + strand at 1271.681 kb on + strand, within HP15_1221 at 1271.751 kb on - strand, within HP15_1221 at 1271.959 kb on - strand, within HP15_1221 at 1272.006 kb on + strand, within HP15_1221 at 1272.026 kb on - strand, within HP15_1221 at 1272.064 kb on + strand, within HP15_1221 at 1272.072 kb on - strand, within HP15_1221 at 1272.191 kb on - strand, within HP15_1221 at 1272.215 kb on - strand, within HP15_1221 at 1272.376 kb on + strand, within HP15_1221 at 1272.556 kb on + strand, within HP15_1222 at 1272.557 kb on + strand, within HP15_1222 at 1272.774 kb on + strand at 1272.796 kb on + strand, within HP15_1223 at 1272.815 kb on + strand, within HP15_1223 at 1272.823 kb on - strand, within HP15_1223 at 1272.883 kb on + strand, within HP15_1223 at 1272.985 kb on - strand, within HP15_1223
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 1,270,619 + HP15_1220 0.68 -0.4 1,270,668 + HP15_1220 0.70 -0.3 1,270,676 - HP15_1220 0.70 -1.0 1,270,726 + HP15_1220 0.72 -0.9 1,270,748 - HP15_1220 0.73 +0.5 1,270,757 + HP15_1220 0.73 +0.5 1,270,813 + HP15_1220 0.75 -1.7 1,271,174 + HP15_1220 0.88 +0.9 1,271,303 + +1.7 1,271,535 + +0.2 1,271,551 - +0.4 1,271,586 + +0.4 1,271,597 - -0.3 1,271,617 + +0.3 1,271,681 + HP15_1221 0.15 +0.1 1,271,751 - HP15_1221 0.22 +0.5 1,271,959 - HP15_1221 0.45 +0.2 1,272,006 + HP15_1221 0.50 +0.3 1,272,026 - HP15_1221 0.52 +1.1 1,272,064 + HP15_1221 0.56 +0.6 1,272,072 - HP15_1221 0.57 -0.1 1,272,191 - HP15_1221 0.70 -0.1 1,272,215 - HP15_1221 0.72 +0.3 1,272,376 + HP15_1221 0.90 -0.8 1,272,556 + HP15_1222 0.32 +0.4 1,272,557 + HP15_1222 0.32 +1.9 1,272,774 + +0.4 1,272,796 + HP15_1223 0.10 +0.3 1,272,815 + HP15_1223 0.13 -0.4 1,272,823 - HP15_1223 0.14 +0.0 1,272,883 + HP15_1223 0.22 +0.4 1,272,985 - HP15_1223 0.35 +0.7
Or see this region's nucleotide sequence