Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10270

Experiment: m.b. copper (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. copper (II) chloride 0.3 mM
1,063,034	+		PGA1_c10260	0.23	-1.7
1,063,036	-		PGA1_c10260	0.23	-0.3
1,063,070	+		PGA1_c10260	0.26	+0.1
1,063,080	+		PGA1_c10260	0.26	-1.6
1,063,158	-		PGA1_c10260	0.33	-1.5
1,063,158	-		PGA1_c10260	0.33	-1.7
1,063,350	-		PGA1_c10260	0.49	-0.1
1,063,403	+		PGA1_c10260	0.53	+1.1
1,063,423	+		PGA1_c10260	0.55	-0.2
1,063,457	+		PGA1_c10260	0.58	-0.9
1,063,460	-		PGA1_c10260	0.58	+0.4
1,063,465	-		PGA1_c10260	0.58	+0.7
1,063,465	-		PGA1_c10260	0.58	+0.1
1,063,572	+		PGA1_c10260	0.67	-1.6
1,063,614	-		PGA1_c10260	0.71	+0.2
1,063,624	+		PGA1_c10260	0.71	-0.3
1,063,657	-		PGA1_c10260	0.74	-2.5
1,063,664	-		PGA1_c10260	0.75	+0.1
1,063,700	-		PGA1_c10260	0.78	-0.6
1,063,710	-		PGA1_c10260	0.79	-1.4
1,063,728	-		PGA1_c10260	0.80	-0.2
1,063,803	+		PGA1_c10260	0.86	-2.0
1,063,867	-				-3.0
1,063,867	-				-1.1
1,063,896	+				-0.3
1,063,955	-				-1.0
1,063,965	-				-0.2
1,064,013	+				+1.2
1,064,013	+				-2.0
1,064,018	+				-0.7
1,064,107	-				+0.0
1,064,121	+				-0.5
1,064,121	+				+0.6
1,064,134	+		PGA1_c10270	0.11	-1.0
1,064,134	+		PGA1_c10270	0.11	+1.5
1,064,142	-		PGA1_c10270	0.11	+1.6
1,064,142	-		PGA1_c10270	0.11	-0.1
1,064,214	+		PGA1_c10270	0.18	-0.1
1,064,278	+		PGA1_c10270	0.24	+0.7
1,064,278	+		PGA1_c10270	0.24	+0.4
1,064,286	-		PGA1_c10270	0.25	-0.2
1,064,293	+		PGA1_c10270	0.26	+0.3
1,064,293	+		PGA1_c10270	0.26	+0.2
1,064,293	+		PGA1_c10270	0.26	+0.9
1,064,336	+		PGA1_c10270	0.30	+1.1
1,064,339	+		PGA1_c10270	0.30	+2.1
1,064,341	+		PGA1_c10270	0.30	+0.0
1,064,373	+		PGA1_c10270	0.33	+0.7
1,064,411	-		PGA1_c10270	0.37	-1.6
1,064,436	+		PGA1_c10270	0.39	-0.2
1,064,436	+		PGA1_c10270	0.39	+0.7
1,064,436	+		PGA1_c10270	0.39	+1.3
1,064,461	+		PGA1_c10270	0.41	+1.7
1,064,471	+		PGA1_c10270	0.42	+1.1
1,064,479	-		PGA1_c10270	0.43	-0.3
1,064,485	-		PGA1_c10270	0.44	+1.0
1,064,574	+		PGA1_c10270	0.52	+0.9
1,064,574	+		PGA1_c10270	0.52	+0.7
1,064,656	+		PGA1_c10270	0.60	+1.4
1,064,686	+		PGA1_c10270	0.63	-1.3
1,064,694	-		PGA1_c10270	0.63	-0.3
1,064,718	-		PGA1_c10270	0.66	+0.1
1,064,723	-		PGA1_c10270	0.66	-0.4
1,064,754	-		PGA1_c10270	0.69	+0.4
1,064,754	-		PGA1_c10270	0.69	+1.2
1,064,866	-		PGA1_c10270	0.79	+1.7
1,064,880	+		PGA1_c10270	0.81	+0.0
1,064,922	+		PGA1_c10270	0.85	-0.1
1,064,925	-		PGA1_c10270	0.85	-1.3
1,064,938	-		PGA1_c10270	0.86	+1.4
1,064,953	-		PGA1_c10270	0.88	+0.6
1,065,013	+				+0.2
1,065,124	+				-0.4
1,065,124	+				+0.4
1,065,124	+				+0.6
1,065,132	-				+1.1
1,065,132	-				+0.3
1,065,132	-				+0.3
1,065,132	-				+0.6
1,065,132	-				+0.4
1,065,137	-				-2.3
1,065,142	-				+0.4
1,065,142	-				+1.4
1,065,142	-				+0.3
1,065,142	-				+0.6
1,065,142	-				-2.1
1,065,143	-				-1.5
1,065,160	-				-1.0
1,065,200	+				+1.2
1,065,308	+				+0.5
1,065,313	+				+0.7
1,065,316	-				+0.0
1,065,316	-				-0.3
1,065,316	-				+1.1
1,065,344	+				-0.8
1,065,354	+				-0.3
1,065,354	+				-0.2
1,065,461	-		PGA1_c10280	0.15	+0.1
1,065,466	-		PGA1_c10280	0.15	-0.6
1,065,475	-		PGA1_c10280	0.16	+1.3
1,065,485	+		PGA1_c10280	0.17	-0.9
1,065,558	+		PGA1_c10280	0.23	-0.4
1,065,558	+		PGA1_c10280	0.23	+0.3
1,065,558	+		PGA1_c10280	0.23	-1.3
1,065,558	+		PGA1_c10280	0.23	+1.1
1,065,558	+		PGA1_c10280	0.23	+0.5
1,065,560	+		PGA1_c10280	0.23	+0.5
1,065,566	-		PGA1_c10280	0.24	+0.0
1,065,568	-		PGA1_c10280	0.24	-0.6
1,065,572	+		PGA1_c10280	0.24	+0.2
1,065,589	+		PGA1_c10280	0.26	+1.7
1,065,611	-		PGA1_c10280	0.28	-1.1
1,065,619	-		PGA1_c10280	0.28	-1.8
1,065,645	+		PGA1_c10280	0.31	+0.1
1,065,653	-		PGA1_c10280	0.31	+0.9
1,065,653	-		PGA1_c10280	0.31	-1.0
1,065,703	-		PGA1_c10280	0.36	-0.1
1,065,739	+		PGA1_c10280	0.39	+0.2
1,065,747	-		PGA1_c10280	0.39	-1.2
1,065,797	+		PGA1_c10280	0.44	-1.3
1,065,812	-		PGA1_c10280	0.45	+0.4
1,065,818	-		PGA1_c10280	0.46	+1.1
1,065,834	-		PGA1_c10280	0.47	+1.7
1,065,840	+		PGA1_c10280	0.47	-1.3
1,065,840	+		PGA1_c10280	0.47	-0.1
1,065,858	-		PGA1_c10280	0.49	-0.3
1,065,921	+		PGA1_c10280	0.54	+0.0
1,065,980	-		PGA1_c10280	0.60	-0.9
1,065,987	+		PGA1_c10280	0.60	-2.3
1,065,987	+		PGA1_c10280	0.60	+0.5
1,065,987	+		PGA1_c10280	0.60	-0.3
1,065,987	+		PGA1_c10280	0.60	+0.4
1,065,987	+		PGA1_c10280	0.60	-0.9
1,065,987	+		PGA1_c10280	0.60	+3.1
1,065,987	+		PGA1_c10280	0.60	+1.7
1,065,987	+		PGA1_c10280	0.60	+0.3
1,065,987	+		PGA1_c10280	0.60	-0.1
1,065,987	+		PGA1_c10280	0.60	+0.7
1,065,987	+		PGA1_c10280	0.60	-1.3
1,065,987	+		PGA1_c10280	0.60	+0.9
1,065,987	+		PGA1_c10280	0.60	-0.5
1,065,987	+		PGA1_c10280	0.60	+1.0
1,065,995	-		PGA1_c10280	0.61	+0.0
1,065,995	-		PGA1_c10280	0.61	+0.3
1,065,995	-		PGA1_c10280	0.61	+1.1
1,065,995	-		PGA1_c10280	0.61	-0.3
1,065,995	-		PGA1_c10280	0.61	+0.2
1,065,995	-		PGA1_c10280	0.61	-1.7
1,065,995	-		PGA1_c10280	0.61	+0.3
1,065,995	-		PGA1_c10280	0.61	+1.3
1,065,995	-		PGA1_c10280	0.61	+1.1
1,065,995	-		PGA1_c10280	0.61	+0.4
1,065,995	-		PGA1_c10280	0.61	-0.2
1,065,995	-		PGA1_c10280	0.61	+0.9
1,065,995	-		PGA1_c10280	0.61	-0.2
1,065,995	-		PGA1_c10280	0.61	+0.6
1,066,006	+		PGA1_c10280	0.62	+3.0
1,066,047	+		PGA1_c10280	0.65	-0.9
1,066,055	-		PGA1_c10280	0.66	+0.1
1,066,081	-		PGA1_c10280	0.68	-0.1
1,066,083	+		PGA1_c10280	0.68	+0.1