Strain Fitness in Dechlorosoma suillum PS around Dsui_3129
Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,351,753 | - | Dsui_3128 | 0.65 | +0.3 | |
3,351,778 | + | Dsui_3128 | 0.66 | -0.9 | |
3,351,817 | + | Dsui_3128 | 0.68 | -0.3 | |
3,351,817 | + | +0.7 | |||
3,351,834 | + | Dsui_3128 | 0.68 | -0.3 | |
3,351,963 | + | Dsui_3128 | 0.74 | -0.3 | |
3,352,022 | + | Dsui_3128 | 0.76 | +0.7 | |
3,352,030 | - | Dsui_3128 | 0.76 | -0.3 | |
3,352,070 | - | Dsui_3128 | 0.78 | +2.3 | |
3,352,130 | - | Dsui_3128 | 0.80 | +2.7 | |
3,352,151 | - | Dsui_3128 | 0.81 | +0.7 | |
3,352,201 | + | +0.7 | |||
3,352,257 | + | Dsui_3128 | 0.85 | +0.7 | |
3,352,324 | + | Dsui_3128 | 0.88 | -0.9 | |
3,352,325 | + | Dsui_3128 | 0.88 | -1.1 | |
3,352,331 | + | Dsui_3128 | 0.88 | -0.9 | |
3,352,332 | - | Dsui_3128 | 0.88 | +1.4 | |
3,352,332 | - | Dsui_3128 | 0.88 | +1.8 | |
3,352,415 | - | +2.1 | |||
3,352,438 | + | -1.6 | |||
3,352,958 | - | +0.9 | |||
3,353,061 | + | Dsui_3130 | 0.79 | +1.0 | |
3,353,232 | + | +0.3 | |||
3,353,269 | + | -0.3 | |||
3,353,269 | + | +0.7 | |||
3,353,277 | - | -0.1 | |||
3,353,277 | - | -1.0 | |||
3,353,277 | - | -0.5 | |||
3,353,339 | - | -0.4 |
Or see this region's nucleotide sequence