Strain Fitness in Dechlorosoma suillum PS around Dsui_3082
Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,299,008 | + | Dsui_3081 | 0.78 | -1.9 | |
3,299,050 | + | Dsui_3081 | 0.80 | -2.6 | |
3,299,119 | + | Dsui_3081 | 0.84 | -1.1 | |
3,299,498 | + | +0.8 | |||
3,299,510 | + | -0.3 | |||
3,299,513 | - | -0.9 | |||
3,300,492 | + | Dsui_3082 | 0.85 | +1.5 | |
3,300,580 | + | +0.1 | |||
3,300,633 | + | -0.0 | |||
3,300,757 | - | -0.9 | |||
3,300,780 | + | -0.1 | |||
3,300,859 | + | +2.4 | |||
3,300,936 | - | Dsui_3083 | 0.11 | -0.3 | |
3,300,994 | - | +0.7 | |||
3,301,128 | - | Dsui_3083 | 0.28 | +0.7 | |
3,301,188 | - | Dsui_3083 | 0.33 | -0.3 | |
3,301,328 | + | Dsui_3083 | 0.45 | +1.6 | |
3,301,328 | + | Dsui_3083 | 0.45 | +1.6 | |
3,301,444 | - | Dsui_3083 | 0.55 | +0.7 | |
3,301,451 | + | Dsui_3083 | 0.56 | +1.6 | |
3,301,454 | - | Dsui_3083 | 0.56 | +0.7 | |
3,301,481 | - | Dsui_3083 | 0.59 | -1.3 | |
3,301,493 | - | Dsui_3083 | 0.60 | +0.7 | |
3,301,502 | + | Dsui_3083 | 0.61 | +1.6 | |
3,301,557 | + | Dsui_3083 | 0.65 | +2.0 | |
3,301,606 | + | Dsui_3083 | 0.70 | +1.4 | |
3,301,644 | + | Dsui_3083 | 0.73 | +1.5 | |
3,301,645 | + | Dsui_3083 | 0.73 | +1.6 |
Or see this region's nucleotide sequence