Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2928 and Dsui_2929 are separated by 108 nucleotides Dsui_2929 and Dsui_2930 are separated by 125 nucleotides
Dsui_2928: Dsui_2928 - ABC-type Fe3+ transport system, periplasmic component, at 3,131,630 to 3,132,652
_2928
Dsui_2929: Dsui_2929 - hypothetical protein, at 3,132,761 to 3,133,180
_2929
Dsui_2930: Dsui_2930 - outer membrane protein, at 3,133,306 to 3,134,676
_2930
Position (kb)
3132
3133
3134 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3131.843 kb on + strand, within Dsui_2928 at 3131.843 kb on + strand, within Dsui_2928 at 3131.891 kb on - strand, within Dsui_2928 at 3131.894 kb on + strand, within Dsui_2928 at 3131.907 kb on + strand, within Dsui_2928 at 3131.957 kb on - strand, within Dsui_2928 at 3132.022 kb on - strand, within Dsui_2928 at 3132.045 kb on - strand, within Dsui_2928 at 3132.075 kb on - strand, within Dsui_2928 at 3132.086 kb on + strand, within Dsui_2928 at 3132.094 kb on - strand, within Dsui_2928 at 3132.099 kb on - strand, within Dsui_2928 at 3132.108 kb on + strand, within Dsui_2928 at 3132.178 kb on - strand, within Dsui_2928 at 3132.238 kb on + strand, within Dsui_2928 at 3132.238 kb on + strand, within Dsui_2928 at 3132.241 kb on - strand, within Dsui_2928 at 3132.246 kb on - strand at 3132.246 kb on - strand, within Dsui_2928 at 3132.246 kb on - strand at 3132.246 kb on - strand at 3132.328 kb on + strand at 3132.427 kb on + strand, within Dsui_2928 at 3132.435 kb on - strand, within Dsui_2928 at 3132.515 kb on + strand, within Dsui_2928 at 3132.526 kb on + strand at 3132.565 kb on + strand at 3132.573 kb on - strand at 3132.634 kb on - strand at 3132.644 kb on - strand at 3132.776 kb on + strand at 3132.880 kb on - strand at 3132.963 kb on - strand, within Dsui_2929 at 3132.973 kb on - strand, within Dsui_2929 at 3133.000 kb on - strand, within Dsui_2929 at 3133.007 kb on + strand, within Dsui_2929 at 3133.011 kb on + strand, within Dsui_2929 at 3133.250 kb on + strand at 3133.250 kb on + strand at 3133.681 kb on + strand, within Dsui_2930 at 3133.802 kb on + strand, within Dsui_2930 at 3133.854 kb on - strand at 3133.928 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.01 mg/ml remove 3,131,843 + Dsui_2928 0.21 -0.3 3,131,843 + Dsui_2928 0.21 -0.5 3,131,891 - Dsui_2928 0.26 -0.2 3,131,894 + Dsui_2928 0.26 +1.8 3,131,907 + Dsui_2928 0.27 +0.2 3,131,957 - Dsui_2928 0.32 -0.2 3,132,022 - Dsui_2928 0.38 -1.8 3,132,045 - Dsui_2928 0.41 -0.8 3,132,075 - Dsui_2928 0.43 +0.8 3,132,086 + Dsui_2928 0.45 +3.1 3,132,094 - Dsui_2928 0.45 -1.2 3,132,099 - Dsui_2928 0.46 -1.8 3,132,108 + Dsui_2928 0.47 -1.3 3,132,178 - Dsui_2928 0.54 +0.8 3,132,238 + Dsui_2928 0.59 +1.4 3,132,238 + Dsui_2928 0.59 +1.0 3,132,241 - Dsui_2928 0.60 +0.8 3,132,246 - +0.8 3,132,246 - Dsui_2928 0.60 -1.5 3,132,246 - -0.8 3,132,246 - +0.8 3,132,328 + +2.4 3,132,427 + Dsui_2928 0.78 -0.3 3,132,435 - Dsui_2928 0.79 +0.8 3,132,515 + Dsui_2928 0.87 +3.6 3,132,526 + +0.8 3,132,565 + -0.7 3,132,573 - -0.8 3,132,634 - +0.8 3,132,644 - +0.8 3,132,776 + +0.1 3,132,880 - +0.8 3,132,963 - Dsui_2929 0.48 +0.8 3,132,973 - Dsui_2929 0.50 +0.8 3,133,000 - Dsui_2929 0.57 -2.4 3,133,007 + Dsui_2929 0.59 -0.4 3,133,011 + Dsui_2929 0.60 -0.8 3,133,250 + +0.8 3,133,250 + +0.8 3,133,681 + Dsui_2930 0.27 -1.2 3,133,802 + Dsui_2930 0.36 -1.2 3,133,854 - +0.8 3,133,928 + +0.8
Or see this region's nucleotide sequence