Strain Fitness in Dechlorosoma suillum PS around Dsui_2498
Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,645,913 | - | Dsui_2497 | 0.48 | +0.7 | |
2,645,929 | + | Dsui_2497 | 0.49 | +0.7 | |
2,646,027 | + | Dsui_2497 | 0.55 | +0.7 | |
2,646,377 | + | Dsui_2497 | 0.76 | -0.9 | |
2,646,490 | - | Dsui_2497 | 0.83 | -1.9 | |
2,646,803 | - | -0.3 | |||
2,646,852 | + | Dsui_2498 | 0.17 | +0.7 | |
2,646,876 | + | Dsui_2498 | 0.24 | -1.9 | |
2,646,908 | - | +0.7 | |||
2,646,908 | - | Dsui_2498 | 0.33 | +0.7 | |
2,646,942 | - | Dsui_2498 | 0.42 | -0.9 | |
2,646,979 | - | Dsui_2498 | 0.52 | -0.3 | |
2,647,155 | - | -1.6 | |||
2,647,222 | + | Dsui_2499 | 0.30 | +0.7 | |
2,647,227 | + | Dsui_2499 | 0.32 | -0.9 | |
2,647,235 | - | Dsui_2499 | 0.36 | +0.7 | |
2,647,299 | + | Dsui_2499 | 0.63 | +0.7 | |
2,647,307 | - | +0.7 | |||
2,647,324 | - | +0.7 | |||
2,647,474 | - | +0.4 | |||
2,647,692 | + | Dsui_2500 | 0.41 | -0.9 | |
2,647,748 | + | Dsui_2500 | 0.50 | +0.7 | |
2,647,769 | + | Dsui_2500 | 0.54 | +0.7 | |
2,647,777 | - | Dsui_2500 | 0.55 | -0.3 | |
2,647,798 | + | +0.7 | |||
2,647,800 | + | +0.7 | |||
2,647,823 | - | Dsui_2500 | 0.62 | -0.3 | |
2,648,008 | + | -0.9 | |||
2,648,016 | - | -0.3 | |||
2,648,016 | - | -0.3 | |||
2,648,016 | - | -0.3 | |||
2,648,016 | - | +0.0 | |||
2,648,016 | - | -0.4 |
Or see this region's nucleotide sequence