Strain Fitness in Dechlorosoma suillum PS around Dsui_2182
Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,316,278 | - | Dsui_2181 | 0.10 | -1.1 | |
2,316,475 | - | Dsui_2181 | 0.35 | +0.5 | |
2,316,486 | - | Dsui_2181 | 0.37 | +0.4 | |
2,316,535 | + | -0.1 | |||
2,316,580 | - | Dsui_2181 | 0.49 | +0.6 | |
2,316,742 | + | -0.1 | |||
2,316,790 | + | Dsui_2181 | 0.75 | -1.4 | |
2,316,818 | - | Dsui_2181 | 0.79 | -2.6 | |
2,316,837 | - | -0.7 | |||
2,316,853 | - | Dsui_2181 | 0.83 | -0.6 | |
2,316,854 | + | -0.1 | |||
2,317,207 | - | -0.1 | |||
2,317,296 | + | -0.1 | |||
2,317,455 | - | -1.4 | |||
2,317,543 | + | -0.7 | |||
2,317,592 | + | Dsui_2182 | 0.30 | -1.1 | |
2,317,706 | + | -0.7 | |||
2,317,957 | - | -0.1 | |||
2,318,032 | + | Dsui_2182 | 0.64 | -1.9 | |
2,318,042 | - | +0.9 | |||
2,318,084 | - | +0.9 | |||
2,318,156 | + | Dsui_2182 | 0.73 | -1.1 | |
2,318,284 | - | +0.9 | |||
2,318,595 | + | +0.9 | |||
2,318,605 | + | +0.9 | |||
2,318,768 | + | -0.1 | |||
2,318,823 | + | -0.1 | |||
2,318,948 | + | +0.9 | |||
2,319,343 | + | +0.9 | |||
2,319,369 | - | Dsui_2183 | 0.71 | -1.5 | |
2,319,402 | - | Dsui_2183 | 0.75 | +0.9 |
Or see this region's nucleotide sequence