Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2093 and Dsui_2094 are separated by 307 nucleotides Dsui_2094 and Dsui_2095 are separated by 72 nucleotides
Dsui_2093: Dsui_2093 - hypothetical protein, at 2,214,481 to 2,215,341
_2093
Dsui_2094: Dsui_2094 - putative autotransporter protein, at 2,215,649 to 2,219,413
_2094
Dsui_2095: Dsui_2095 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,219,486 to 2,220,172
_2095
Position (kb)
2215
2216
2217
2218
2219
2220 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2214.735 kb on - strand, within Dsui_2093 at 2214.763 kb on - strand, within Dsui_2093 at 2214.837 kb on - strand, within Dsui_2093 at 2215.095 kb on + strand, within Dsui_2093 at 2215.137 kb on + strand, within Dsui_2093 at 2215.278 kb on + strand at 2215.296 kb on + strand at 2215.698 kb on - strand at 2215.779 kb on + strand at 2215.802 kb on + strand at 2216.066 kb on - strand, within Dsui_2094 at 2216.151 kb on + strand at 2216.262 kb on - strand, within Dsui_2094 at 2216.310 kb on + strand at 2216.318 kb on - strand at 2216.936 kb on + strand, within Dsui_2094 at 2216.989 kb on - strand at 2217.011 kb on - strand, within Dsui_2094 at 2217.071 kb on + strand at 2217.127 kb on + strand at 2217.145 kb on - strand at 2217.209 kb on - strand at 2217.212 kb on + strand at 2217.220 kb on - strand, within Dsui_2094 at 2217.303 kb on - strand at 2217.337 kb on + strand at 2217.495 kb on - strand at 2217.507 kb on + strand at 2217.669 kb on - strand at 2217.675 kb on + strand at 2217.900 kb on + strand at 2218.019 kb on - strand, within Dsui_2094 at 2218.124 kb on - strand at 2218.154 kb on - strand at 2218.215 kb on - strand at 2218.261 kb on - strand at 2218.261 kb on - strand, within Dsui_2094 at 2218.403 kb on + strand at 2218.486 kb on + strand, within Dsui_2094 at 2218.868 kb on + strand, within Dsui_2094 at 2218.876 kb on - strand at 2219.023 kb on - strand at 2219.294 kb on + strand at 2219.491 kb on + strand at 2219.491 kb on + strand at 2219.533 kb on + strand at 2219.671 kb on - strand at 2219.778 kb on + strand, within Dsui_2095 at 2219.782 kb on + strand, within Dsui_2095 at 2219.946 kb on + strand at 2220.064 kb on - strand at 2220.161 kb on + strand at 2220.211 kb on + strand at 2220.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.01 mg/ml remove 2,214,735 - Dsui_2093 0.30 -0.7 2,214,763 - Dsui_2093 0.33 -1.9 2,214,837 - Dsui_2093 0.41 -0.7 2,215,095 + Dsui_2093 0.71 -0.1 2,215,137 + Dsui_2093 0.76 -0.1 2,215,278 + -0.1 2,215,296 + -0.1 2,215,698 - -0.1 2,215,779 + -0.7 2,215,802 + +0.9 2,216,066 - Dsui_2094 0.11 -1.1 2,216,151 + +0.9 2,216,262 - Dsui_2094 0.16 +0.9 2,216,310 + +0.9 2,216,318 - +0.9 2,216,936 + Dsui_2094 0.34 +0.5 2,216,989 - +0.9 2,217,011 - Dsui_2094 0.36 +0.1 2,217,071 + -0.7 2,217,127 + +0.9 2,217,145 - +0.9 2,217,209 - +0.9 2,217,212 + +0.9 2,217,220 - Dsui_2094 0.42 -0.7 2,217,303 - +0.9 2,217,337 + +0.9 2,217,495 - +0.9 2,217,507 + -0.1 2,217,669 - +0.9 2,217,675 + +0.9 2,217,900 + -0.1 2,218,019 - Dsui_2094 0.63 +0.3 2,218,124 - -1.1 2,218,154 - +0.9 2,218,215 - +0.9 2,218,261 - -0.1 2,218,261 - Dsui_2094 0.69 -2.4 2,218,403 + +0.9 2,218,486 + Dsui_2094 0.75 -0.1 2,218,868 + Dsui_2094 0.85 +0.9 2,218,876 - +0.9 2,219,023 - -0.7 2,219,294 + +0.9 2,219,491 + +0.9 2,219,491 + -0.1 2,219,533 + +0.6 2,219,671 - +0.9 2,219,778 + Dsui_2095 0.43 +1.9 2,219,782 + Dsui_2095 0.43 -0.7 2,219,946 + +0.9 2,220,064 - +0.9 2,220,161 + -0.7 2,220,211 + -1.4 2,220,316 - +0.9
Or see this region's nucleotide sequence