Strain Fitness in Dechlorosoma suillum PS around Dsui_1685

Experiment: ALP with Fusidic 0.01 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1683 and Dsui_1684 are separated by 6 nucleotidesDsui_1684 and Dsui_1685 are separated by 197 nucleotidesDsui_1685 and Dsui_1686 are separated by 118 nucleotides Dsui_1683: Dsui_1683 - biopolymer transport protein, at 1,770,862 to 1,771,605 _1683 Dsui_1684: Dsui_1684 - TonB family protein, at 1,771,612 to 1,772,271 _1684 Dsui_1685: Dsui_1685 - inorganic pyrophosphatase, at 1,772,469 to 1,773,017 _1685 Dsui_1686: Dsui_1686 - NAD+ synthetase, at 1,773,136 to 1,774,761 _1686 Position (kb) 1772 1773 1774Strain fitness (log2 ratio) -1 0 1at 1771.605 kb on - strandat 1772.416 kb on + strandat 1772.440 kb on + strandat 1773.011 kb on + strandat 1773.055 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Fusidic 0.01 mg/ml
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1,771,605 - +0.3
1,772,416 + +0.5
1,772,440 + +0.5
1,773,011 + -0.3
1,773,055 + -0.4

Or see this region's nucleotide sequence