Experiment: ALP with Fusidic 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1432 and Dsui_1433 are separated by 8 nucleotides Dsui_1433 and Dsui_1434 overlap by 1 nucleotides Dsui_1434 and Dsui_1435 overlap by 1 nucleotides Dsui_1435 and Dsui_1436 are separated by 12 nucleotides
Dsui_1432: Dsui_1432 - chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain, at 1,486,202 to 1,487,329
_1432
Dsui_1433: Dsui_1433 - chemotaxis protein, at 1,487,338 to 1,487,835
_1433
Dsui_1434: Dsui_1434 - methylase of chemotaxis methyl-accepting protein, at 1,487,835 to 1,488,647
_1434
Dsui_1435: Dsui_1435 - chemotaxis signal transduction protein, at 1,488,647 to 1,489,204
_1435
Dsui_1436: Dsui_1436 - methyl-accepting chemotaxis protein, at 1,489,217 to 1,490,839
_1436
Position (kb)
1487
1488
1489 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1487.035 kb on + strand, within Dsui_1432 at 1487.077 kb on + strand, within Dsui_1432 at 1487.077 kb on + strand, within Dsui_1432 at 1487.120 kb on - strand, within Dsui_1432 at 1487.194 kb on - strand, within Dsui_1432 at 1487.216 kb on - strand, within Dsui_1432 at 1487.226 kb on - strand at 1487.350 kb on + strand at 1487.423 kb on + strand, within Dsui_1433 at 1487.431 kb on + strand, within Dsui_1433 at 1487.866 kb on + strand at 1487.874 kb on - strand at 1487.888 kb on + strand at 1487.988 kb on + strand, within Dsui_1434 at 1487.988 kb on + strand, within Dsui_1434 at 1487.991 kb on - strand, within Dsui_1434 at 1488.030 kb on - strand, within Dsui_1434 at 1488.207 kb on - strand, within Dsui_1434 at 1488.286 kb on + strand, within Dsui_1434 at 1488.286 kb on + strand, within Dsui_1434 at 1488.673 kb on - strand at 1488.724 kb on + strand, within Dsui_1435 at 1488.863 kb on + strand, within Dsui_1435 at 1488.863 kb on + strand, within Dsui_1435 at 1488.871 kb on - strand, within Dsui_1435 at 1488.909 kb on + strand, within Dsui_1435 at 1489.127 kb on + strand, within Dsui_1435 at 1489.205 kb on + strand at 1489.317 kb on + strand at 1489.441 kb on + strand, within Dsui_1436 at 1489.481 kb on - strand, within Dsui_1436 at 1489.509 kb on - strand, within Dsui_1436 at 1489.509 kb on - strand, within Dsui_1436
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.01 mg/ml remove 1,487,035 + Dsui_1432 0.74 -0.5 1,487,077 + Dsui_1432 0.78 -1.5 1,487,077 + Dsui_1432 0.78 -1.9 1,487,120 - Dsui_1432 0.81 -0.4 1,487,194 - Dsui_1432 0.88 -0.2 1,487,216 - Dsui_1432 0.90 -0.2 1,487,226 - -0.2 1,487,350 + +0.5 1,487,423 + Dsui_1433 0.17 -1.5 1,487,431 + Dsui_1433 0.19 -1.9 1,487,866 + -1.9 1,487,874 - -0.1 1,487,888 + -0.5 1,487,988 + Dsui_1434 0.19 +0.5 1,487,988 + Dsui_1434 0.19 +0.5 1,487,991 - Dsui_1434 0.19 +0.1 1,488,030 - Dsui_1434 0.24 -0.1 1,488,207 - Dsui_1434 0.46 -0.0 1,488,286 + Dsui_1434 0.55 +2.0 1,488,286 + Dsui_1434 0.55 +1.5 1,488,673 - -0.5 1,488,724 + Dsui_1435 0.14 -1.1 1,488,863 + Dsui_1435 0.39 -1.1 1,488,863 + Dsui_1435 0.39 +0.0 1,488,871 - Dsui_1435 0.40 -0.2 1,488,909 + Dsui_1435 0.47 +0.5 1,489,127 + Dsui_1435 0.86 +0.5 1,489,205 + -1.5 1,489,317 + +0.5 1,489,441 + Dsui_1436 0.14 -1.1 1,489,481 - Dsui_1436 0.16 +0.4 1,489,509 - Dsui_1436 0.18 -0.1 1,489,509 - Dsui_1436 0.18 +0.7
Or see this region's nucleotide sequence