Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2736 and DvMF_2737 are separated by 13 nucleotides DvMF_2737 and DvMF_2738 are separated by 32 nucleotides
DvMF_2736: DvMF_2736 - type II secretion system protein (RefSeq), at 3,461,723 to 3,462,703
_2736
DvMF_2737: DvMF_2737 - type II secretion system protein (RefSeq), at 3,462,717 to 3,463,682
_2737
DvMF_2738: DvMF_2738 - type II secretion system protein E (RefSeq), at 3,463,715 to 3,465,589
_2738
Position (kb)
3462
3463
3464 Strain fitness (log2 ratio)
-1
0
1 at 3461.802 kb on + strand at 3461.892 kb on - strand, within DvMF_2736 at 3462.034 kb on + strand, within DvMF_2736 at 3462.116 kb on + strand, within DvMF_2736 at 3462.124 kb on - strand, within DvMF_2736 at 3462.266 kb on - strand, within DvMF_2736 at 3462.278 kb on + strand, within DvMF_2736 at 3462.348 kb on - strand, within DvMF_2736 at 3462.348 kb on - strand, within DvMF_2736 at 3462.454 kb on + strand, within DvMF_2736 at 3462.551 kb on + strand, within DvMF_2736 at 3462.634 kb on - strand at 3462.799 kb on - strand at 3462.828 kb on - strand, within DvMF_2737 at 3462.870 kb on + strand, within DvMF_2737 at 3462.937 kb on + strand, within DvMF_2737 at 3463.069 kb on - strand, within DvMF_2737 at 3463.503 kb on - strand, within DvMF_2737 at 3463.567 kb on - strand, within DvMF_2737 at 3463.616 kb on + strand at 3464.213 kb on + strand, within DvMF_2738 at 3464.351 kb on - strand, within DvMF_2738
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,461,802 + +0.1 3,461,892 - DvMF_2736 0.17 +0.2 3,462,034 + DvMF_2736 0.32 -0.3 3,462,116 + DvMF_2736 0.40 -0.1 3,462,124 - DvMF_2736 0.41 +0.5 3,462,266 - DvMF_2736 0.55 +0.0 3,462,278 + DvMF_2736 0.57 +0.1 3,462,348 - DvMF_2736 0.64 +1.0 3,462,348 - DvMF_2736 0.64 +0.6 3,462,454 + DvMF_2736 0.75 +0.2 3,462,551 + DvMF_2736 0.84 +0.1 3,462,634 - +0.3 3,462,799 - +0.6 3,462,828 - DvMF_2737 0.11 +0.2 3,462,870 + DvMF_2737 0.16 -0.7 3,462,937 + DvMF_2737 0.23 -0.0 3,463,069 - DvMF_2737 0.36 -0.3 3,463,503 - DvMF_2737 0.81 +1.3 3,463,567 - DvMF_2737 0.88 -0.8 3,463,616 + +0.9 3,464,213 + DvMF_2738 0.27 -0.0 3,464,351 - DvMF_2738 0.34 -0.1
Or see this region's nucleotide sequence