Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2504 and DvMF_2505 are separated by 63 nucleotides DvMF_2505 and DvMF_2506 are separated by 448 nucleotides DvMF_2506 and DvMF_2507 are separated by 152 nucleotides DvMF_2507 and DvMF_2508 are separated by 376 nucleotides
DvMF_2504: DvMF_2504 - no description, at 3,157,805 to 3,158,798
_2504
DvMF_2505: DvMF_2505 - protein of unknown function UPF0047 (RefSeq), at 3,158,862 to 3,159,257
_2505
DvMF_2506: DvMF_2506 - selenocysteine-specific translation elongation factor (RefSeq), at 3,159,706 to 3,161,658
_2506
DvMF_2507: DvMF_2507 - hypothetical protein (RefSeq), at 3,161,811 to 3,162,074
_2507
DvMF_2508: DvMF_2508 - polynucleotide phosphorylase/polyadenylase (RefSeq), at 3,162,451 to 3,164,721
_2508
Position (kb)
3159
3160
3161
3162 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3158.708 kb on + strand at 3158.720 kb on + strand at 3158.792 kb on + strand at 3158.855 kb on + strand at 3158.873 kb on - strand at 3158.998 kb on + strand, within DvMF_2505 at 3159.125 kb on + strand, within DvMF_2505 at 3159.139 kb on + strand, within DvMF_2505 at 3159.139 kb on + strand, within DvMF_2505 at 3159.144 kb on + strand, within DvMF_2505 at 3159.265 kb on + strand at 3159.310 kb on + strand at 3159.363 kb on + strand at 3159.450 kb on + strand at 3159.547 kb on - strand at 3159.715 kb on + strand at 3159.744 kb on + strand at 3159.991 kb on + strand, within DvMF_2506 at 3160.017 kb on - strand, within DvMF_2506 at 3160.310 kb on + strand, within DvMF_2506 at 3160.522 kb on - strand, within DvMF_2506 at 3160.524 kb on + strand, within DvMF_2506 at 3160.980 kb on + strand, within DvMF_2506 at 3160.988 kb on - strand, within DvMF_2506 at 3161.299 kb on - strand, within DvMF_2506 at 3161.707 kb on + strand at 3162.136 kb on + strand at 3162.261 kb on - strand at 3162.366 kb on + strand at 3162.374 kb on - strand at 3162.374 kb on - strand at 3162.428 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,158,708 + -5.3 3,158,720 + -5.4 3,158,792 + +0.5 3,158,855 + +0.6 3,158,873 - +0.1 3,158,998 + DvMF_2505 0.34 +0.6 3,159,125 + DvMF_2505 0.66 +0.3 3,159,139 + DvMF_2505 0.70 +0.1 3,159,139 + DvMF_2505 0.70 +0.2 3,159,144 + DvMF_2505 0.71 -0.1 3,159,265 + +0.7 3,159,310 + +0.3 3,159,363 + -0.1 3,159,450 + +0.3 3,159,547 - -0.1 3,159,715 + -0.8 3,159,744 + -1.9 3,159,991 + DvMF_2506 0.15 -0.1 3,160,017 - DvMF_2506 0.16 -0.3 3,160,310 + DvMF_2506 0.31 -1.1 3,160,522 - DvMF_2506 0.42 -0.9 3,160,524 + DvMF_2506 0.42 -1.9 3,160,980 + DvMF_2506 0.65 +0.7 3,160,988 - DvMF_2506 0.66 -0.5 3,161,299 - DvMF_2506 0.82 -1.3 3,161,707 + +0.4 3,162,136 + +0.3 3,162,261 - +0.3 3,162,366 + +1.1 3,162,374 - -0.2 3,162,374 - +0.4 3,162,428 - +0.6
Or see this region's nucleotide sequence