Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1391 and DvMF_1392 overlap by 4 nucleotides DvMF_1392 and DvMF_1393 are separated by 200 nucleotides DvMF_1393 and DvMF_1394 overlap by 44 nucleotides DvMF_1394 and truA are separated by 3 nucleotides
DvMF_1391: DvMF_1391 - protein of unknown function DUF62 (RefSeq), at 1,698,438 to 1,699,325
_1391
DvMF_1392: DvMF_1392 - cobalamin-5-phosphate synthase CobS (RefSeq), at 1,699,322 to 1,700,077
_1392
DvMF_1393: DvMF_1393 - flagellar export protein FliJ (RefSeq), at 1,700,278 to 1,700,718
_1393
DvMF_1394: DvMF_1394 - hypothetical protein (RefSeq), at 1,700,675 to 1,701,652
_1394
DvMF_1395: truA - tRNA pseudouridine synthase A (RefSeq), at 1,701,656 to 1,702,489
truA
Position (kb) 1700
1701 Strain fitness (log2 ratio) -1
0
1
2 at 1699.285 kb on - strand at 1699.359 kb on + strand at 1700.085 kb on - strand at 1700.348 kb on - strand, within DvMF_1393 at 1701.403 kb on + strand, within DvMF_1394 at 1701.430 kb on + strand, within DvMF_1394 at 1701.486 kb on - strand, within DvMF_1394 at 1701.575 kb on + strand at 1701.698 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,699,285 - +1.0 1,699,359 + -1.3 1,700,085 - +0.6 1,700,348 - DvMF_1393 0.16 +2.0 1,701,403 + DvMF_1394 0.74 +0.9 1,701,430 + DvMF_1394 0.77 +0.9 1,701,486 - DvMF_1394 0.83 +1.3 1,701,575 + +1.3 1,701,698 - +0.7
Or see this region's nucleotide sequence