Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1155 and DvMF_1156 are separated by 306 nucleotides DvMF_1156 and DvMF_1157 are separated by 169 nucleotides
DvMF_1155: DvMF_1155 - RNA methyltransferase, TrmH family, group 1 (RefSeq), at 1,416,747 to 1,417,547
_1155
DvMF_1156: DvMF_1156 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 1,417,854 to 1,420,274
_1156
DvMF_1157: DvMF_1157 - putative PAS/PAC sensor protein (RefSeq), at 1,420,444 to 1,422,615
_1157
Position (kb)
1417
1418
1419
1420
1421 Strain fitness (log2 ratio)
-1
0
1 at 1416.890 kb on + strand, within DvMF_1155 at 1416.990 kb on - strand, within DvMF_1155 at 1417.042 kb on - strand, within DvMF_1155 at 1417.066 kb on + strand, within DvMF_1155 at 1417.069 kb on - strand, within DvMF_1155 at 1417.210 kb on - strand, within DvMF_1155 at 1417.220 kb on - strand, within DvMF_1155 at 1417.241 kb on - strand, within DvMF_1155 at 1417.259 kb on + strand, within DvMF_1155 at 1417.487 kb on + strand at 1417.490 kb on - strand at 1417.677 kb on - strand at 1417.865 kb on - strand at 1417.924 kb on + strand at 1417.961 kb on + strand at 1418.151 kb on + strand, within DvMF_1156 at 1418.151 kb on + strand, within DvMF_1156 at 1418.225 kb on + strand, within DvMF_1156 at 1418.225 kb on - strand, within DvMF_1156 at 1418.433 kb on + strand, within DvMF_1156 at 1418.433 kb on + strand, within DvMF_1156 at 1418.445 kb on + strand, within DvMF_1156 at 1418.515 kb on + strand, within DvMF_1156 at 1418.605 kb on + strand, within DvMF_1156 at 1418.651 kb on + strand, within DvMF_1156 at 1418.659 kb on - strand, within DvMF_1156 at 1418.734 kb on + strand, within DvMF_1156 at 1418.774 kb on - strand, within DvMF_1156 at 1419.457 kb on + strand, within DvMF_1156 at 1419.564 kb on + strand, within DvMF_1156 at 1419.591 kb on - strand, within DvMF_1156 at 1420.165 kb on - strand at 1420.359 kb on - strand at 1420.478 kb on + strand at 1420.880 kb on - strand, within DvMF_1157 at 1420.893 kb on + strand, within DvMF_1157 at 1421.037 kb on + strand, within DvMF_1157 at 1421.052 kb on - strand, within DvMF_1157 at 1421.073 kb on - strand, within DvMF_1157 at 1421.078 kb on + strand, within DvMF_1157
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,416,890 + DvMF_1155 0.18 +0.1 1,416,990 - DvMF_1155 0.30 +1.0 1,417,042 - DvMF_1155 0.37 +1.0 1,417,066 + DvMF_1155 0.40 -0.3 1,417,069 - DvMF_1155 0.40 -0.1 1,417,210 - DvMF_1155 0.58 +0.6 1,417,220 - DvMF_1155 0.59 +0.1 1,417,241 - DvMF_1155 0.62 +1.0 1,417,259 + DvMF_1155 0.64 +0.4 1,417,487 + -0.4 1,417,490 - +0.8 1,417,677 - +0.3 1,417,865 - -0.3 1,417,924 + +0.3 1,417,961 + -1.1 1,418,151 + DvMF_1156 0.12 +0.4 1,418,151 + DvMF_1156 0.12 +0.3 1,418,225 + DvMF_1156 0.15 +0.3 1,418,225 - DvMF_1156 0.15 -0.3 1,418,433 + DvMF_1156 0.24 +0.4 1,418,433 + DvMF_1156 0.24 -0.5 1,418,445 + DvMF_1156 0.24 +0.2 1,418,515 + DvMF_1156 0.27 -0.6 1,418,605 + DvMF_1156 0.31 -0.1 1,418,651 + DvMF_1156 0.33 +0.2 1,418,659 - DvMF_1156 0.33 +0.3 1,418,734 + DvMF_1156 0.36 +0.0 1,418,774 - DvMF_1156 0.38 +0.1 1,419,457 + DvMF_1156 0.66 +0.5 1,419,564 + DvMF_1156 0.71 -0.2 1,419,591 - DvMF_1156 0.72 +0.1 1,420,165 - +0.9 1,420,359 - +0.3 1,420,478 + +1.7 1,420,880 - DvMF_1157 0.20 +0.4 1,420,893 + DvMF_1157 0.21 +0.6 1,421,037 + DvMF_1157 0.27 +0.1 1,421,052 - DvMF_1157 0.28 +0.6 1,421,073 - DvMF_1157 0.29 +0.4 1,421,078 + DvMF_1157 0.29 +0.3
Or see this region's nucleotide sequence