Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0618

Experiment: Defined MoLS4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0617 and DvMF_0618 are separated by 235 nucleotides DvMF_0617: DvMF_0617 - diguanylate cyclase/phosphodiesterase (RefSeq), at 733,173 to 735,824 _0617 DvMF_0618: DvMF_0618 - hypothetical protein (RefSeq), at 736,060 to 736,821 _0618 Position (kb) 736 737Strain fitness (log2 ratio) -1 0 1at 735.112 kb on - strand, within DvMF_0617at 735.285 kb on + strand, within DvMF_0617at 735.434 kb on + strand, within DvMF_0617at 735.454 kb on - strand, within DvMF_0617at 735.872 kb on - strandat 736.007 kb on - strandat 736.197 kb on + strand, within DvMF_0618at 736.207 kb on + strand, within DvMF_0618at 736.230 kb on + strand, within DvMF_0618at 736.255 kb on - strand, within DvMF_0618at 736.255 kb on - strand, within DvMF_0618at 736.287 kb on + strand, within DvMF_0618at 736.327 kb on + strand, within DvMF_0618at 736.345 kb on - strand, within DvMF_0618at 736.360 kb on - strand, within DvMF_0618at 736.385 kb on - strand, within DvMF_0618at 736.403 kb on - strand, within DvMF_0618at 736.415 kb on - strand, within DvMF_0618at 736.455 kb on - strand, within DvMF_0618at 736.487 kb on + strand, within DvMF_0618at 736.529 kb on - strand, within DvMF_0618

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Per-strain Table

Position Strand Gene LocusTag Fraction Defined MoLS4
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735,112 - DvMF_0617 0.73 +0.5
735,285 + DvMF_0617 0.80 +0.5
735,434 + DvMF_0617 0.85 +0.1
735,454 - DvMF_0617 0.86 -0.4
735,872 - +0.6
736,007 - +0.3
736,197 + DvMF_0618 0.18 +0.3
736,207 + DvMF_0618 0.19 +1.3
736,230 + DvMF_0618 0.22 +0.6
736,255 - DvMF_0618 0.26 +0.2
736,255 - DvMF_0618 0.26 +1.0
736,287 + DvMF_0618 0.30 +0.7
736,327 + DvMF_0618 0.35 +0.6
736,345 - DvMF_0618 0.37 +0.6
736,360 - DvMF_0618 0.39 +0.3
736,385 - DvMF_0618 0.43 +1.0
736,403 - DvMF_0618 0.45 +0.4
736,415 - DvMF_0618 0.47 +0.6
736,455 - DvMF_0618 0.52 +0.6
736,487 + DvMF_0618 0.56 +0.2
736,529 - DvMF_0618 0.62 +0.7

Or see this region's nucleotide sequence