Experiment: Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0296 and DVU0297 are separated by 640 nucleotides DVU0297 and DVU0298 are separated by 610 nucleotides
DVU0296: DVU0296 - peptidase, M24 family (TIGR), at 341,931 to 343,001
DVU0296
DVU0297: DVU0297 - hypothetical protein (TIGR), at 343,642 to 343,836
DVU0297
DVU0298: DVU0298 - hypothetical protein (TIGR), at 344,447 to 345,232
DVU0298
Position (kb) 343
344 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 342.688 kb on + strand, within DVU0296 at 342.698 kb on + strand, within DVU0296 at 342.708 kb on + strand, within DVU0296 at 342.713 kb on + strand, within DVU0296 at 342.713 kb on + strand, within DVU0296 at 342.713 kb on + strand, within DVU0296 at 342.713 kb on + strand, within DVU0296 at 342.713 kb on + strand, within DVU0296 at 342.721 kb on - strand, within DVU0296 at 342.721 kb on - strand, within DVU0296 at 342.752 kb on - strand, within DVU0296 at 342.760 kb on + strand, within DVU0296 at 342.790 kb on - strand, within DVU0296 at 342.864 kb on - strand, within DVU0296 at 342.870 kb on - strand, within DVU0296 at 342.870 kb on - strand, within DVU0296 at 342.926 kb on + strand at 342.926 kb on + strand at 342.929 kb on - strand at 342.934 kb on - strand at 342.949 kb on - strand at 343.004 kb on - strand at 343.004 kb on - strand at 343.065 kb on - strand at 343.080 kb on + strand at 343.098 kb on - strand at 343.146 kb on + strand at 343.153 kb on + strand at 343.154 kb on - strand at 343.207 kb on + strand at 343.218 kb on + strand at 343.219 kb on + strand at 343.317 kb on - strand at 343.319 kb on + strand at 343.327 kb on - strand at 343.357 kb on + strand at 343.365 kb on - strand at 343.369 kb on + strand at 343.464 kb on - strand at 343.519 kb on - strand at 343.544 kb on + strand at 343.597 kb on + strand at 343.644 kb on + strand at 343.695 kb on + strand, within DVU0297 at 343.698 kb on - strand, within DVU0297 at 343.700 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.713 kb on + strand, within DVU0297 at 343.720 kb on + strand, within DVU0297 at 343.721 kb on - strand, within DVU0297 at 343.721 kb on - strand, within DVU0297 at 343.721 kb on - strand, within DVU0297 at 343.721 kb on - strand, within DVU0297 at 343.728 kb on - strand, within DVU0297 at 343.773 kb on + strand, within DVU0297 at 343.783 kb on + strand, within DVU0297 at 343.806 kb on - strand, within DVU0297 at 343.851 kb on - strand at 343.872 kb on + strand at 343.906 kb on - strand at 343.949 kb on - strand at 343.975 kb on + strand at 343.983 kb on - strand at 344.008 kb on + strand at 344.011 kb on - strand at 344.094 kb on - strand at 344.120 kb on - strand at 344.147 kb on - strand at 344.166 kb on + strand at 344.258 kb on + strand at 344.328 kb on - strand at 344.330 kb on - strand at 344.350 kb on - strand at 344.350 kb on - strand at 344.360 kb on - strand at 344.385 kb on + strand at 344.424 kb on - strand at 344.430 kb on + strand at 344.477 kb on - strand at 344.501 kb on + strand at 344.591 kb on + strand, within DVU0298 at 344.613 kb on + strand, within DVU0298 at 344.623 kb on + strand, within DVU0298 at 344.631 kb on - strand, within DVU0298 at 344.631 kb on - strand, within DVU0298 at 344.777 kb on + strand, within DVU0298 at 344.829 kb on - strand, within DVU0298
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Thiosulfate (60/30-15 mM) + 0.1% Yeast Extract remove 342,688 + DVU0296 0.71 +0.3 342,698 + DVU0296 0.72 -0.8 342,708 + DVU0296 0.73 -0.9 342,713 + DVU0296 0.73 +0.2 342,713 + DVU0296 0.73 -0.5 342,713 + DVU0296 0.73 -0.6 342,713 + DVU0296 0.73 -0.2 342,713 + DVU0296 0.73 +0.0 342,721 - DVU0296 0.74 +0.2 342,721 - DVU0296 0.74 +0.7 342,752 - DVU0296 0.77 +3.5 342,760 + DVU0296 0.77 -0.3 342,790 - DVU0296 0.80 +2.2 342,864 - DVU0296 0.87 -0.6 342,870 - DVU0296 0.88 -1.5 342,870 - DVU0296 0.88 -1.1 342,926 + +2.6 342,926 + +0.3 342,929 - -1.1 342,934 - -1.2 342,949 - -0.7 343,004 - +0.9 343,004 - -0.6 343,065 - +0.4 343,080 + +1.7 343,098 - +0.7 343,146 + +1.7 343,153 + +0.6 343,154 - -0.0 343,207 + +1.7 343,218 + -0.6 343,219 + +0.3 343,317 - -0.7 343,319 + +0.3 343,327 - +0.7 343,357 + +0.4 343,365 - +0.2 343,369 + -1.1 343,464 - +1.7 343,519 - -1.8 343,544 + +0.4 343,597 + -0.9 343,644 + +0.7 343,695 + DVU0297 0.27 +0.2 343,698 - DVU0297 0.29 -0.3 343,700 + DVU0297 0.30 -0.1 343,713 + DVU0297 0.36 +2.3 343,713 + DVU0297 0.36 +0.7 343,713 + DVU0297 0.36 +0.7 343,713 + DVU0297 0.36 +0.9 343,713 + DVU0297 0.36 +0.4 343,713 + DVU0297 0.36 +0.0 343,713 + DVU0297 0.36 -0.1 343,720 + DVU0297 0.40 +0.6 343,721 - DVU0297 0.41 +4.4 343,721 - DVU0297 0.41 +0.2 343,721 - DVU0297 0.41 -0.3 343,721 - DVU0297 0.41 -0.1 343,728 - DVU0297 0.44 -1.3 343,773 + DVU0297 0.67 -0.2 343,783 + DVU0297 0.72 -0.2 343,806 - DVU0297 0.84 -0.1 343,851 - +0.7 343,872 + +2.3 343,906 - +0.2 343,949 - -2.0 343,975 + +0.7 343,983 - -1.4 344,008 + -0.5 344,011 - -2.2 344,094 - -0.3 344,120 - +0.3 344,147 - -0.2 344,166 + -0.2 344,258 + +0.1 344,328 - +1.7 344,330 - -0.1 344,350 - -0.3 344,350 - +2.3 344,360 - +0.7 344,385 + +0.2 344,424 - +0.2 344,430 + -0.2 344,477 - -1.0 344,501 + -0.8 344,591 + DVU0298 0.18 +0.7 344,613 + DVU0298 0.21 +1.7 344,623 + DVU0298 0.22 -1.0 344,631 - DVU0298 0.23 +0.7 344,631 - DVU0298 0.23 +0.2 344,777 + DVU0298 0.42 -0.4 344,829 - DVU0298 0.49 +3.4
Or see this region's nucleotide sequence