Experiment: Aluminum chloride 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_787 and Pf6N2E2_788 are separated by 486 nucleotides Pf6N2E2_788 and Pf6N2E2_789 are separated by 283 nucleotides
Pf6N2E2_787 - YD repeat protein, at 901,796 to 906,883
_787
Pf6N2E2_788 - hypothetical protein, at 907,370 to 909,799
_788
Pf6N2E2_789 - hypothetical protein, at 910,083 to 911,894
_789
Position (kb) 907
908
909
910 Strain fitness (log2 ratio) -2
-1
0
1
2 at 906.388 kb on + strand at 906.390 kb on + strand at 906.390 kb on + strand at 906.423 kb on + strand at 906.537 kb on + strand at 906.933 kb on + strand at 907.030 kb on + strand at 907.141 kb on + strand at 907.322 kb on - strand at 907.322 kb on - strand at 907.328 kb on - strand at 907.444 kb on + strand at 907.463 kb on + strand at 907.463 kb on + strand at 908.434 kb on + strand, within Pf6N2E2_788 at 908.632 kb on + strand, within Pf6N2E2_788 at 909.055 kb on + strand, within Pf6N2E2_788 at 909.080 kb on + strand, within Pf6N2E2_788 at 909.080 kb on + strand, within Pf6N2E2_788 at 909.356 kb on + strand, within Pf6N2E2_788 at 909.357 kb on - strand, within Pf6N2E2_788 at 909.362 kb on + strand, within Pf6N2E2_788 at 909.362 kb on + strand, within Pf6N2E2_788 at 909.362 kb on + strand, within Pf6N2E2_788 at 909.426 kb on - strand, within Pf6N2E2_788 at 909.804 kb on + strand at 909.804 kb on + strand at 909.805 kb on - strand at 909.879 kb on + strand at 909.889 kb on - strand at 909.889 kb on - strand at 909.998 kb on - strand at 910.182 kb on + strand at 910.182 kb on + strand at 910.183 kb on - strand at 910.183 kb on - strand at 910.276 kb on - strand, within Pf6N2E2_789 at 910.276 kb on - strand, within Pf6N2E2_789 at 910.383 kb on + strand, within Pf6N2E2_789 at 910.383 kb on + strand, within Pf6N2E2_789 at 910.383 kb on + strand, within Pf6N2E2_789 at 910.384 kb on - strand, within Pf6N2E2_789 at 910.384 kb on - strand, within Pf6N2E2_789 at 910.444 kb on - strand, within Pf6N2E2_789 at 910.464 kb on - strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.589 kb on + strand, within Pf6N2E2_789 at 910.590 kb on - strand, within Pf6N2E2_789 at 910.590 kb on - strand, within Pf6N2E2_789 at 910.590 kb on - strand, within Pf6N2E2_789 at 910.590 kb on - strand, within Pf6N2E2_789 at 910.590 kb on - strand, within Pf6N2E2_789 at 910.590 kb on - strand, within Pf6N2E2_789 at 910.640 kb on + strand, within Pf6N2E2_789 at 910.676 kb on + strand, within Pf6N2E2_789 at 910.743 kb on - strand, within Pf6N2E2_789 at 910.743 kb on - strand, within Pf6N2E2_789 at 910.761 kb on + strand, within Pf6N2E2_789 at 910.761 kb on + strand, within Pf6N2E2_789
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.00005 M remove 906,388 + +0.6 906,390 + -0.7 906,390 + +0.7 906,423 + +0.6 906,537 + +0.7 906,933 + +0.1 907,030 + -0.6 907,141 + +0.1 907,322 - +0.5 907,322 - +2.3 907,328 - +1.3 907,444 + +0.7 907,463 + -1.8 907,463 + +0.5 908,434 + Pf6N2E2_788 0.44 -2.0 908,632 + Pf6N2E2_788 0.52 -0.9 909,055 + Pf6N2E2_788 0.69 -0.0 909,080 + Pf6N2E2_788 0.70 +0.2 909,080 + Pf6N2E2_788 0.70 -0.5 909,356 + Pf6N2E2_788 0.82 -1.4 909,357 - Pf6N2E2_788 0.82 -0.0 909,362 + Pf6N2E2_788 0.82 -1.2 909,362 + Pf6N2E2_788 0.82 -0.3 909,362 + Pf6N2E2_788 0.82 -1.8 909,426 - Pf6N2E2_788 0.85 +0.0 909,804 + +0.2 909,804 + -0.5 909,805 - -0.3 909,879 + +0.7 909,889 - -0.7 909,889 - +0.3 909,998 - +0.3 910,182 + -1.3 910,182 + +1.3 910,183 - +0.9 910,183 - -1.0 910,276 - Pf6N2E2_789 0.11 +0.4 910,276 - Pf6N2E2_789 0.11 +0.3 910,383 + Pf6N2E2_789 0.17 -1.0 910,383 + Pf6N2E2_789 0.17 +1.3 910,383 + Pf6N2E2_789 0.17 -0.1 910,384 - Pf6N2E2_789 0.17 -0.5 910,384 - Pf6N2E2_789 0.17 +0.3 910,444 - Pf6N2E2_789 0.20 -0.3 910,464 - Pf6N2E2_789 0.21 +1.3 910,589 + Pf6N2E2_789 0.28 -0.2 910,589 + Pf6N2E2_789 0.28 +0.3 910,589 + Pf6N2E2_789 0.28 -1.8 910,589 + Pf6N2E2_789 0.28 -0.4 910,589 + Pf6N2E2_789 0.28 +0.4 910,589 + Pf6N2E2_789 0.28 -1.4 910,589 + Pf6N2E2_789 0.28 +0.3 910,589 + Pf6N2E2_789 0.28 -0.3 910,589 + Pf6N2E2_789 0.28 -0.5 910,589 + Pf6N2E2_789 0.28 -1.0 910,589 + Pf6N2E2_789 0.28 -0.9 910,590 - Pf6N2E2_789 0.28 +0.7 910,590 - Pf6N2E2_789 0.28 -1.5 910,590 - Pf6N2E2_789 0.28 -0.3 910,590 - Pf6N2E2_789 0.28 +0.2 910,590 - Pf6N2E2_789 0.28 -1.5 910,590 - Pf6N2E2_789 0.28 -1.5 910,640 + Pf6N2E2_789 0.31 -1.9 910,676 + Pf6N2E2_789 0.33 -0.2 910,743 - Pf6N2E2_789 0.36 -0.2 910,743 - Pf6N2E2_789 0.36 -0.4 910,761 + Pf6N2E2_789 0.37 -0.2 910,761 + Pf6N2E2_789 0.37 -1.0
Or see this region's nucleotide sequence