Experiment: Aluminum chloride 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6044 and Pf6N2E2_6045 are separated by 156 nucleotides Pf6N2E2_6045 and Pf6N2E2_6046 are separated by 373 nucleotides
Pf6N2E2_6044 - Sensor histidine kinase/response regulator, at 6,863,562 to 6,865,652
_6044
Pf6N2E2_6045 - hypothetical protein, at 6,865,809 to 6,865,994
_6045
Pf6N2E2_6046 - hypothetical protein, at 6,866,368 to 6,866,778
_6046
Position (kb)
6865
6866 Strain fitness (log2 ratio)
-2
-1
0
1 at 6864.855 kb on + strand, within Pf6N2E2_6044 at 6864.855 kb on + strand, within Pf6N2E2_6044 at 6864.856 kb on - strand, within Pf6N2E2_6044 at 6864.902 kb on - strand, within Pf6N2E2_6044 at 6864.902 kb on - strand, within Pf6N2E2_6044 at 6864.902 kb on - strand, within Pf6N2E2_6044 at 6865.212 kb on + strand, within Pf6N2E2_6044 at 6865.213 kb on - strand, within Pf6N2E2_6044 at 6865.213 kb on - strand, within Pf6N2E2_6044 at 6865.453 kb on + strand at 6865.453 kb on + strand at 6865.453 kb on + strand at 6865.453 kb on + strand at 6865.453 kb on + strand at 6865.453 kb on + strand at 6865.453 kb on + strand at 6865.454 kb on - strand at 6865.625 kb on - strand at 6865.636 kb on + strand at 6865.821 kb on + strand at 6865.884 kb on + strand, within Pf6N2E2_6045 at 6866.119 kb on - strand at 6866.119 kb on - strand at 6866.127 kb on - strand at 6866.181 kb on + strand at 6866.181 kb on + strand at 6866.181 kb on + strand at 6866.181 kb on + strand at 6866.181 kb on + strand at 6866.182 kb on - strand at 6866.182 kb on - strand at 6866.182 kb on - strand at 6866.185 kb on + strand at 6866.185 kb on + strand at 6866.185 kb on + strand at 6866.185 kb on + strand at 6866.185 kb on + strand at 6866.185 kb on + strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.186 kb on - strand at 6866.213 kb on + strand at 6866.213 kb on + strand at 6866.214 kb on - strand at 6866.254 kb on - strand at 6866.306 kb on + strand at 6866.364 kb on + strand at 6866.365 kb on - strand at 6866.365 kb on - strand at 6866.393 kb on + strand at 6866.405 kb on + strand at 6866.405 kb on + strand at 6866.406 kb on - strand at 6866.406 kb on - strand at 6866.406 kb on - strand at 6866.406 kb on - strand at 6866.406 kb on - strand at 6866.471 kb on + strand, within Pf6N2E2_6046 at 6866.471 kb on + strand, within Pf6N2E2_6046 at 6866.471 kb on + strand, within Pf6N2E2_6046 at 6866.472 kb on - strand, within Pf6N2E2_6046 at 6866.472 kb on - strand, within Pf6N2E2_6046 at 6866.472 kb on - strand, within Pf6N2E2_6046 at 6866.753 kb on - strand at 6866.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.00005 M remove 6,864,855 + Pf6N2E2_6044 0.62 -0.8 6,864,855 + Pf6N2E2_6044 0.62 +0.3 6,864,856 - Pf6N2E2_6044 0.62 +0.1 6,864,902 - Pf6N2E2_6044 0.64 -0.7 6,864,902 - Pf6N2E2_6044 0.64 -0.4 6,864,902 - Pf6N2E2_6044 0.64 +0.5 6,865,212 + Pf6N2E2_6044 0.79 -0.7 6,865,213 - Pf6N2E2_6044 0.79 +1.2 6,865,213 - Pf6N2E2_6044 0.79 +0.1 6,865,453 + +0.6 6,865,453 + -0.0 6,865,453 + -1.0 6,865,453 + +0.6 6,865,453 + -0.2 6,865,453 + -2.4 6,865,453 + +1.5 6,865,454 - -0.4 6,865,625 - -0.1 6,865,636 + +0.3 6,865,821 + -0.5 6,865,884 + Pf6N2E2_6045 0.40 +1.3 6,866,119 - +0.3 6,866,119 - +0.4 6,866,127 - -0.8 6,866,181 + -0.1 6,866,181 + -0.7 6,866,181 + +0.2 6,866,181 + -0.2 6,866,181 + -0.7 6,866,182 - -0.2 6,866,182 - -0.5 6,866,182 - +0.4 6,866,185 + -0.3 6,866,185 + +0.1 6,866,185 + -0.3 6,866,185 + -0.6 6,866,185 + -0.7 6,866,185 + -0.1 6,866,186 - -0.0 6,866,186 - -0.7 6,866,186 - -0.4 6,866,186 - +0.8 6,866,186 - +0.1 6,866,186 - -0.1 6,866,186 - +1.1 6,866,186 - +0.5 6,866,213 + -2.1 6,866,213 + -0.5 6,866,214 - -0.4 6,866,254 - -0.1 6,866,306 + +1.0 6,866,364 + -0.2 6,866,365 - -0.4 6,866,365 - -0.4 6,866,393 + -0.3 6,866,405 + -0.3 6,866,405 + +0.3 6,866,406 - -0.9 6,866,406 - -0.9 6,866,406 - -0.4 6,866,406 - +1.2 6,866,406 - +0.7 6,866,471 + Pf6N2E2_6046 0.25 -0.8 6,866,471 + Pf6N2E2_6046 0.25 -0.7 6,866,471 + Pf6N2E2_6046 0.25 -0.7 6,866,472 - Pf6N2E2_6046 0.25 -1.3 6,866,472 - Pf6N2E2_6046 0.25 +0.2 6,866,472 - Pf6N2E2_6046 0.25 -0.0 6,866,753 - -0.5 6,866,753 - -0.1
Or see this region's nucleotide sequence