Experiment: Aluminum chloride 0.00005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1696 and Pf6N2E2_1697 are separated by 116 nucleotides Pf6N2E2_1697 and Pf6N2E2_1698 overlap by 4 nucleotides
Pf6N2E2_1696 - Alkanesulfonates-binding protein, at 2,004,570 to 2,005,418
_1696
Pf6N2E2_1697 - Alkanesulfonate monooxygenase (EC 1.14.14.5), at 2,005,535 to 2,006,665
_1697
Pf6N2E2_1698 - amidohydrolase 2, at 2,006,662 to 2,007,510
_1698
Position (kb)
2005
2006
2007 Strain fitness (log2 ratio)
-1
0
1
2 at 2004.849 kb on + strand, within Pf6N2E2_1696 at 2004.850 kb on - strand, within Pf6N2E2_1696 at 2004.942 kb on + strand, within Pf6N2E2_1696 at 2005.008 kb on + strand, within Pf6N2E2_1696 at 2005.009 kb on - strand, within Pf6N2E2_1696 at 2005.416 kb on + strand at 2005.426 kb on - strand at 2005.584 kb on - strand at 2005.626 kb on - strand at 2005.626 kb on - strand at 2006.057 kb on + strand, within Pf6N2E2_1697 at 2006.114 kb on + strand, within Pf6N2E2_1697 at 2006.114 kb on + strand, within Pf6N2E2_1697 at 2006.115 kb on - strand, within Pf6N2E2_1697 at 2006.115 kb on - strand, within Pf6N2E2_1697 at 2006.115 kb on - strand, within Pf6N2E2_1697 at 2006.319 kb on - strand, within Pf6N2E2_1697 at 2006.549 kb on + strand, within Pf6N2E2_1697 at 2006.569 kb on - strand at 2006.696 kb on - strand at 2006.969 kb on + strand, within Pf6N2E2_1698 at 2006.970 kb on - strand, within Pf6N2E2_1698 at 2006.999 kb on + strand, within Pf6N2E2_1698 at 2007.101 kb on - strand, within Pf6N2E2_1698 at 2007.170 kb on - strand, within Pf6N2E2_1698 at 2007.170 kb on - strand, within Pf6N2E2_1698 at 2007.313 kb on + strand, within Pf6N2E2_1698 at 2007.313 kb on + strand, within Pf6N2E2_1698 at 2007.313 kb on + strand, within Pf6N2E2_1698 at 2007.314 kb on - strand, within Pf6N2E2_1698 at 2007.314 kb on - strand, within Pf6N2E2_1698 at 2007.314 kb on - strand, within Pf6N2E2_1698 at 2007.314 kb on - strand, within Pf6N2E2_1698 at 2007.314 kb on - strand, within Pf6N2E2_1698 at 2007.341 kb on - strand, within Pf6N2E2_1698 at 2007.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 0.00005 M remove 2,004,849 + Pf6N2E2_1696 0.33 +0.9 2,004,850 - Pf6N2E2_1696 0.33 +0.7 2,004,942 + Pf6N2E2_1696 0.44 +0.6 2,005,008 + Pf6N2E2_1696 0.52 -1.0 2,005,009 - Pf6N2E2_1696 0.52 -0.2 2,005,416 + -1.6 2,005,426 - -1.2 2,005,584 - -0.6 2,005,626 - +0.4 2,005,626 - +0.1 2,006,057 + Pf6N2E2_1697 0.46 -0.5 2,006,114 + Pf6N2E2_1697 0.51 -0.7 2,006,114 + Pf6N2E2_1697 0.51 -0.5 2,006,115 - Pf6N2E2_1697 0.51 -0.4 2,006,115 - Pf6N2E2_1697 0.51 -0.6 2,006,115 - Pf6N2E2_1697 0.51 -0.6 2,006,319 - Pf6N2E2_1697 0.69 -0.8 2,006,549 + Pf6N2E2_1697 0.90 +1.4 2,006,569 - +1.0 2,006,696 - +0.5 2,006,969 + Pf6N2E2_1698 0.36 -1.1 2,006,970 - Pf6N2E2_1698 0.36 +2.2 2,006,999 + Pf6N2E2_1698 0.40 +0.4 2,007,101 - Pf6N2E2_1698 0.52 +0.1 2,007,170 - Pf6N2E2_1698 0.60 +0.9 2,007,170 - Pf6N2E2_1698 0.60 -0.6 2,007,313 + Pf6N2E2_1698 0.77 -0.3 2,007,313 + Pf6N2E2_1698 0.77 -1.1 2,007,313 + Pf6N2E2_1698 0.77 +0.4 2,007,314 - Pf6N2E2_1698 0.77 +0.0 2,007,314 - Pf6N2E2_1698 0.77 +1.4 2,007,314 - Pf6N2E2_1698 0.77 +0.4 2,007,314 - Pf6N2E2_1698 0.77 +1.5 2,007,314 - Pf6N2E2_1698 0.77 -0.0 2,007,341 - Pf6N2E2_1698 0.80 -0.6 2,007,548 + +0.5
Or see this region's nucleotide sequence