Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05247 and H281DRAFT_05248 are separated by 232 nucleotides H281DRAFT_05248 and H281DRAFT_05249 are separated by 193 nucleotides H281DRAFT_05249 and H281DRAFT_05250 are separated by 469 nucleotides
H281DRAFT_05247: H281DRAFT_05247 - drug resistance transporter, EmrB/QacA subfamily, at 214,158 to 215,555
_05247
H281DRAFT_05248: H281DRAFT_05248 - hypothetical protein, at 215,788 to 215,940
_05248
H281DRAFT_05249: H281DRAFT_05249 - hypothetical protein, at 216,134 to 216,274
_05249
H281DRAFT_05250: H281DRAFT_05250 - phosphatidylglycerol lysyltransferase, at 216,744 to 219,338
_05250
Position (kb) 216
217 Strain fitness (log2 ratio) -1
0
1 at 215.147 kb on - strand, within H281DRAFT_05247 at 215.399 kb on - strand, within H281DRAFT_05247 at 215.596 kb on + strand at 215.597 kb on - strand at 215.597 kb on - strand at 215.607 kb on + strand at 215.625 kb on + strand at 215.732 kb on - strand at 215.742 kb on + strand at 215.820 kb on + strand, within H281DRAFT_05248 at 215.821 kb on - strand, within H281DRAFT_05248 at 215.938 kb on + strand at 216.026 kb on + strand at 216.113 kb on - strand at 216.119 kb on + strand at 216.240 kb on + strand, within H281DRAFT_05249 at 216.240 kb on + strand, within H281DRAFT_05249 at 216.240 kb on + strand, within H281DRAFT_05249 at 216.514 kb on + strand at 216.522 kb on + strand at 216.758 kb on + strand at 216.758 kb on + strand at 216.758 kb on + strand at 216.758 kb on + strand at 216.759 kb on - strand at 216.765 kb on - strand at 216.826 kb on + strand at 216.827 kb on - strand at 216.981 kb on + strand at 216.982 kb on - strand at 217.151 kb on + strand, within H281DRAFT_05250 at 217.151 kb on + strand, within H281DRAFT_05250 at 217.152 kb on - strand, within H281DRAFT_05250 at 217.184 kb on - strand, within H281DRAFT_05250 at 217.216 kb on + strand, within H281DRAFT_05250 at 217.216 kb on + strand, within H281DRAFT_05250 at 217.216 kb on + strand, within H281DRAFT_05250 at 217.216 kb on + strand, within H281DRAFT_05250 at 217.216 kb on + strand, within H281DRAFT_05250
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 215,147 - H281DRAFT_05247 0.71 -0.3 215,399 - H281DRAFT_05247 0.89 +0.1 215,596 + +0.6 215,597 - +0.9 215,597 - -0.2 215,607 + +0.2 215,625 + +0.5 215,732 - +0.1 215,742 + -0.0 215,820 + H281DRAFT_05248 0.21 -0.3 215,821 - H281DRAFT_05248 0.22 -0.0 215,938 + +0.1 216,026 + +0.6 216,113 - +0.3 216,119 + -0.7 216,240 + H281DRAFT_05249 0.75 +0.4 216,240 + H281DRAFT_05249 0.75 +0.9 216,240 + H281DRAFT_05249 0.75 +0.3 216,514 + +0.3 216,522 + -1.4 216,758 + +0.1 216,758 + +0.3 216,758 + -0.6 216,758 + +0.2 216,759 - -0.3 216,765 - +0.3 216,826 + +0.0 216,827 - +0.1 216,981 + -0.0 216,982 - +0.3 217,151 + H281DRAFT_05250 0.16 -0.4 217,151 + H281DRAFT_05250 0.16 -0.4 217,152 - H281DRAFT_05250 0.16 -0.1 217,184 - H281DRAFT_05250 0.17 -0.0 217,216 + H281DRAFT_05250 0.18 +0.5 217,216 + H281DRAFT_05250 0.18 -0.5 217,216 + H281DRAFT_05250 0.18 +0.7 217,216 + H281DRAFT_05250 0.18 +0.1 217,216 + H281DRAFT_05250 0.18 -0.0
Or see this region's nucleotide sequence