Experiment: Protocatechuic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03436 and H281DRAFT_03437 are separated by 42 nucleotides H281DRAFT_03437 and H281DRAFT_03438 are separated by 28 nucleotides
H281DRAFT_03436: H281DRAFT_03436 - hypothetical protein, at 515,830 to 517,281
_03436
H281DRAFT_03437: H281DRAFT_03437 - Glycosyltransferases involved in cell wall biogenesis, at 517,324 to 518,334
_03437
H281DRAFT_03438: H281DRAFT_03438 - polysaccharide transporter, PST family, at 518,363 to 519,679
_03438
Position (kb) 517
518
519 Strain fitness (log2 ratio) -2
-1
0
1 at 516.647 kb on - strand, within H281DRAFT_03436 at 516.685 kb on + strand, within H281DRAFT_03436 at 516.740 kb on - strand, within H281DRAFT_03436 at 516.740 kb on - strand, within H281DRAFT_03436 at 516.742 kb on - strand, within H281DRAFT_03436 at 516.827 kb on - strand, within H281DRAFT_03436 at 516.902 kb on - strand, within H281DRAFT_03436 at 517.143 kb on - strand at 517.161 kb on + strand at 517.177 kb on - strand at 517.255 kb on + strand at 517.255 kb on + strand at 517.257 kb on + strand at 517.347 kb on - strand at 517.369 kb on + strand at 517.374 kb on - strand at 517.478 kb on - strand, within H281DRAFT_03437 at 517.564 kb on + strand, within H281DRAFT_03437 at 518.193 kb on + strand, within H281DRAFT_03437 at 518.424 kb on - strand at 518.429 kb on + strand at 518.763 kb on + strand, within H281DRAFT_03438 at 518.932 kb on + strand at 519.054 kb on - strand, within H281DRAFT_03438 at 519.156 kb on + strand, within H281DRAFT_03438 at 519.256 kb on - strand, within H281DRAFT_03438
Per-strain Table
Position Strand Gene LocusTag Fraction Protocatechuic Acid (C) remove 516,647 - H281DRAFT_03436 0.56 -0.3 516,685 + H281DRAFT_03436 0.59 +0.2 516,740 - H281DRAFT_03436 0.63 -2.4 516,740 - H281DRAFT_03436 0.63 -0.0 516,742 - H281DRAFT_03436 0.63 -0.2 516,827 - H281DRAFT_03436 0.69 +0.3 516,902 - H281DRAFT_03436 0.74 +0.4 517,143 - +0.4 517,161 + +0.6 517,177 - -0.6 517,255 + +0.2 517,255 + +0.4 517,257 + -0.1 517,347 - +0.5 517,369 + +0.3 517,374 - -0.8 517,478 - H281DRAFT_03437 0.15 +0.0 517,564 + H281DRAFT_03437 0.24 +1.2 518,193 + H281DRAFT_03437 0.86 +0.1 518,424 - +0.1 518,429 + -0.3 518,763 + H281DRAFT_03438 0.30 +0.6 518,932 + -0.3 519,054 - H281DRAFT_03438 0.52 +0.1 519,156 + H281DRAFT_03438 0.60 -0.0 519,256 - H281DRAFT_03438 0.68 +0.9
Or see this region's nucleotide sequence