Experiment: m.b. Paraquat dichloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_743 and HP15_744 are separated by 13 nucleotides HP15_744 and HP15_745 are separated by 17 nucleotides HP15_745 and HP15_746 are separated by 246 nucleotides
HP15_743: HP15_743 - hypothetical protein, at 752,479 to 752,604
_743
HP15_744: HP15_744 - phospholipid/glycerol acyltransferase, at 752,618 to 753,478
_744
HP15_745: HP15_745 - conserved hypothetical protein, at 753,496 to 754,257
_745
HP15_746: HP15_746 - two component transcriptional regulator, winged helix family, at 754,504 to 755,241
_746
Position (kb) 753
754
755 Strain fitness (log2 ratio) -1
0
1 at 752.499 kb on - strand, within HP15_743 at 752.667 kb on + strand at 752.694 kb on + strand at 752.694 kb on + strand at 752.771 kb on - strand, within HP15_744 at 752.775 kb on - strand, within HP15_744 at 752.821 kb on - strand, within HP15_744 at 752.830 kb on + strand at 752.835 kb on + strand, within HP15_744 at 752.985 kb on + strand, within HP15_744 at 752.993 kb on - strand, within HP15_744 at 753.022 kb on + strand, within HP15_744 at 753.058 kb on - strand, within HP15_744 at 753.100 kb on - strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.110 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.219 kb on - strand, within HP15_744 at 753.300 kb on + strand, within HP15_744 at 753.300 kb on + strand, within HP15_744 at 753.347 kb on + strand, within HP15_744 at 753.412 kb on + strand at 753.560 kb on + strand at 753.575 kb on - strand, within HP15_745 at 753.635 kb on + strand, within HP15_745 at 753.635 kb on + strand, within HP15_745 at 753.754 kb on - strand, within HP15_745 at 753.863 kb on - strand, within HP15_745 at 753.863 kb on - strand at 753.934 kb on + strand, within HP15_745 at 754.043 kb on + strand, within HP15_745 at 754.072 kb on + strand, within HP15_745 at 754.175 kb on + strand, within HP15_745 at 754.185 kb on + strand at 754.193 kb on - strand at 754.335 kb on - strand at 754.382 kb on + strand at 754.511 kb on + strand at 754.610 kb on + strand, within HP15_746 at 755.008 kb on + strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.124 kb on - strand, within HP15_746 at 755.137 kb on - strand, within HP15_746 at 755.193 kb on + strand at 755.193 kb on + strand at 755.215 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.002 mg/ml remove 752,499 - HP15_743 0.16 +0.3 752,667 + -0.1 752,694 + -0.9 752,694 + -0.9 752,771 - HP15_744 0.18 -1.0 752,775 - HP15_744 0.18 -0.5 752,821 - HP15_744 0.24 +0.0 752,830 + -0.5 752,835 + HP15_744 0.25 -0.5 752,985 + HP15_744 0.43 -0.5 752,993 - HP15_744 0.44 +0.0 753,022 + HP15_744 0.47 -1.0 753,058 - HP15_744 0.51 +0.5 753,100 - HP15_744 0.56 -0.3 753,107 + HP15_744 0.57 -0.0 753,107 + HP15_744 0.57 -0.4 753,110 - HP15_744 0.57 +0.3 753,115 - HP15_744 0.58 -0.3 753,115 - HP15_744 0.58 -0.5 753,219 - HP15_744 0.70 +1.3 753,300 + HP15_744 0.79 -0.3 753,300 + HP15_744 0.79 -0.3 753,347 + HP15_744 0.85 -1.1 753,412 + +0.2 753,560 + -0.5 753,575 - HP15_745 0.10 +0.9 753,635 + HP15_745 0.18 +1.5 753,635 + HP15_745 0.18 -0.3 753,754 - HP15_745 0.34 -0.4 753,863 - HP15_745 0.48 +1.1 753,863 - -0.5 753,934 + HP15_745 0.57 -0.4 754,043 + HP15_745 0.72 +0.1 754,072 + HP15_745 0.76 +0.5 754,175 + HP15_745 0.89 +0.2 754,185 + -0.1 754,193 - +0.4 754,335 - +0.1 754,382 + -0.8 754,511 + +0.8 754,610 + HP15_746 0.14 +1.1 755,008 + HP15_746 0.68 +1.0 755,016 - HP15_746 0.69 +0.7 755,016 - HP15_746 0.69 +0.4 755,124 - HP15_746 0.84 +0.1 755,137 - HP15_746 0.86 +1.0 755,193 + +0.5 755,193 + +0.5 755,215 + +0.1
Or see this region's nucleotide sequence