Strain Fitness in Marinobacter adhaerens HP15 around HP15_3742
Experiment: m.b. Paraquat dichloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Paraquat dichloride 0.002 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,964,126 | + | +0.8 | |||
| 3,964,134 | - | -0.3 | |||
| 3,964,136 | + | +0.5 | |||
| 3,964,149 | + | -0.6 | |||
| 3,964,167 | - | -1.6 | |||
| 3,964,497 | - | HP15_3742 | 0.30 | -0.6 | |
| 3,964,624 | + | HP15_3742 | 0.40 | -2.6 | |
| 3,964,688 | - | HP15_3742 | 0.45 | -1.5 | |
| 3,964,721 | + | HP15_3742 | 0.48 | -1.9 | |
| 3,964,721 | + | HP15_3742 | 0.48 | +0.7 | |
| 3,964,721 | + | HP15_3742 | 0.48 | -0.7 | |
| 3,964,725 | + | HP15_3742 | 0.48 | -1.3 | |
| 3,964,729 | - | HP15_3742 | 0.48 | -1.1 | |
| 3,964,906 | + | HP15_3742 | 0.62 | -1.3 | |
| 3,965,050 | - | HP15_3742 | 0.73 | +0.0 | |
| 3,965,054 | + | HP15_3742 | 0.74 | -0.0 | |
| 3,965,068 | + | HP15_3742 | 0.75 | -0.9 | |
| 3,965,160 | + | HP15_3742 | 0.82 | -1.6 | |
| 3,965,168 | + | HP15_3742 | 0.83 | -1.0 | |
| 3,965,252 | - | HP15_3742 | 0.89 | -1.4 | |
| 3,965,430 | - | -0.2 | |||
| 3,966,359 | - | +0.2 | |||
| 3,966,361 | - | +0.7 |
Or see this region's nucleotide sequence