Strain Fitness in Dechlorosoma suillum PS around Dsui_3499

Experiment: ALP with Fusidic 0.007 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3498 and Dsui_3499 are separated by 26 nucleotidesDsui_3499 and Dsui_3500 are separated by 225 nucleotides Dsui_3498: Dsui_3498 - isoleucyl-tRNA synthetase, at 3,762,270 to 3,765,062 _3498 Dsui_3499: Dsui_3499 - riboflavin kinase/FMN adenylyltransferase, at 3,765,089 to 3,766,012 _3499 Dsui_3500: Dsui_3500 - N-acetylmuramoyl-L-alanine amidase, at 3,766,238 to 3,767,605 _3500 Position (kb) 3765 3766 3767Strain fitness (log2 ratio) -1 0 1at 3766.143 kb on + strandat 3766.234 kb on + strandat 3766.239 kb on - strandat 3766.252 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml
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3,766,143 + -0.3
3,766,234 + +0.7
3,766,239 - +0.5
3,766,252 - -0.3

Or see this region's nucleotide sequence