Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3413 and Dsui_3414 are separated by 1 nucleotides Dsui_3414 and Dsui_3415 overlap by 4 nucleotides
Dsui_3413: Dsui_3413 - Fe-S oxidoreductase, at 3,665,253 to 3,666,515
_3413
Dsui_3414: Dsui_3414 - FAD/FMN-dependent dehydrogenase, at 3,666,517 to 3,667,617
_3414
Dsui_3415: Dsui_3415 - FAD/FMN-dependent dehydrogenase, at 3,667,614 to 3,669,074
_3415
Position (kb)
3666
3667
3668 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3665.554 kb on + strand, within Dsui_3413 at 3665.562 kb on - strand, within Dsui_3413 at 3666.048 kb on + strand at 3666.102 kb on - strand, within Dsui_3413 at 3666.305 kb on - strand, within Dsui_3413 at 3666.369 kb on - strand, within Dsui_3413 at 3666.406 kb on - strand at 3666.435 kb on + strand at 3666.465 kb on - strand at 3666.524 kb on + strand at 3666.652 kb on + strand, within Dsui_3414 at 3666.727 kb on + strand, within Dsui_3414 at 3666.755 kb on - strand, within Dsui_3414 at 3666.819 kb on + strand, within Dsui_3414 at 3666.856 kb on - strand, within Dsui_3414 at 3666.922 kb on + strand, within Dsui_3414 at 3667.048 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand, within Dsui_3414 at 3667.055 kb on + strand at 3667.069 kb on - strand, within Dsui_3414 at 3667.069 kb on - strand, within Dsui_3414 at 3667.106 kb on + strand at 3667.230 kb on - strand, within Dsui_3414 at 3667.237 kb on - strand, within Dsui_3414 at 3667.278 kb on - strand, within Dsui_3414 at 3667.378 kb on - strand, within Dsui_3414 at 3667.384 kb on - strand, within Dsui_3414 at 3667.419 kb on - strand, within Dsui_3414 at 3667.509 kb on - strand at 3667.564 kb on + strand at 3667.582 kb on - strand at 3667.679 kb on - strand at 3667.700 kb on + strand at 3667.708 kb on - strand at 3667.752 kb on - strand at 3667.752 kb on - strand at 3667.769 kb on - strand, within Dsui_3415 at 3667.820 kb on - strand, within Dsui_3415 at 3667.825 kb on - strand, within Dsui_3415 at 3667.829 kb on + strand, within Dsui_3415 at 3667.922 kb on - strand, within Dsui_3415 at 3667.934 kb on + strand, within Dsui_3415 at 3667.977 kb on + strand, within Dsui_3415 at 3668.007 kb on - strand, within Dsui_3415 at 3668.080 kb on + strand at 3668.088 kb on - strand, within Dsui_3415 at 3668.088 kb on - strand, within Dsui_3415 at 3668.137 kb on + strand, within Dsui_3415 at 3668.256 kb on - strand, within Dsui_3415 at 3668.341 kb on - strand, within Dsui_3415 at 3668.370 kb on - strand, within Dsui_3415 at 3668.385 kb on - strand, within Dsui_3415 at 3668.395 kb on - strand, within Dsui_3415 at 3668.522 kb on + strand, within Dsui_3415
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 3,665,554 + Dsui_3413 0.24 -0.9 3,665,562 - Dsui_3413 0.24 +1.1 3,666,048 + +0.7 3,666,102 - Dsui_3413 0.67 +1.3 3,666,305 - Dsui_3413 0.83 +1.6 3,666,369 - Dsui_3413 0.88 +1.3 3,666,406 - +2.0 3,666,435 + +0.7 3,666,465 - +1.3 3,666,524 + -0.9 3,666,652 + Dsui_3414 0.12 -0.3 3,666,727 + Dsui_3414 0.19 -1.6 3,666,755 - Dsui_3414 0.22 +1.4 3,666,819 + Dsui_3414 0.27 -0.9 3,666,856 - Dsui_3414 0.31 +1.8 3,666,922 + Dsui_3414 0.37 -0.3 3,667,048 + Dsui_3414 0.48 -0.3 3,667,055 + Dsui_3414 0.49 -0.9 3,667,055 + +0.7 3,667,069 - Dsui_3414 0.50 +1.3 3,667,069 - Dsui_3414 0.50 +1.3 3,667,106 + +0.7 3,667,230 - Dsui_3414 0.65 +2.6 3,667,237 - Dsui_3414 0.65 +1.3 3,667,278 - Dsui_3414 0.69 +1.3 3,667,378 - Dsui_3414 0.78 +1.5 3,667,384 - Dsui_3414 0.79 +1.2 3,667,419 - Dsui_3414 0.82 +1.3 3,667,509 - +1.4 3,667,564 + -0.3 3,667,582 - +1.8 3,667,679 - +1.5 3,667,700 + +0.7 3,667,708 - +1.9 3,667,752 - +1.3 3,667,752 - +1.0 3,667,769 - Dsui_3415 0.11 +1.1 3,667,820 - Dsui_3415 0.14 +0.6 3,667,825 - Dsui_3415 0.14 +1.2 3,667,829 + Dsui_3415 0.15 +0.7 3,667,922 - Dsui_3415 0.21 +1.7 3,667,934 + Dsui_3415 0.22 +0.7 3,667,977 + Dsui_3415 0.25 -1.9 3,668,007 - Dsui_3415 0.27 +1.2 3,668,080 + -0.3 3,668,088 - Dsui_3415 0.32 +1.2 3,668,088 - Dsui_3415 0.32 +1.4 3,668,137 + Dsui_3415 0.36 -0.3 3,668,256 - Dsui_3415 0.44 +1.8 3,668,341 - Dsui_3415 0.50 +0.7 3,668,370 - Dsui_3415 0.52 +1.0 3,668,385 - Dsui_3415 0.53 +1.1 3,668,395 - Dsui_3415 0.53 +1.3 3,668,522 + Dsui_3415 0.62 -0.3
Or see this region's nucleotide sequence