Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3101 and Dsui_3102 are separated by 62 nucleotides Dsui_3102 and Dsui_3103 are separated by 165 nucleotides
Dsui_3101: Dsui_3101 - transcriptional regulator, at 3,319,234 to 3,320,133
_3101
Dsui_3102: Dsui_3102 - molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial, at 3,320,196 to 3,320,792
_3102
Dsui_3103: Dsui_3103 - putative signal transduction protein containing EAL and modified HD-GYP domains, at 3,320,958 to 3,322,157
_3103
Position (kb)
3320
3321 Strain fitness (log2 ratio)
-2
-1
0
1 at 3319.224 kb on + strand at 3319.265 kb on - strand at 3319.275 kb on + strand at 3319.330 kb on + strand, within Dsui_3101 at 3319.364 kb on + strand, within Dsui_3101 at 3319.391 kb on + strand, within Dsui_3101 at 3319.399 kb on - strand at 3319.731 kb on + strand, within Dsui_3101 at 3319.765 kb on + strand, within Dsui_3101 at 3319.770 kb on + strand, within Dsui_3101 at 3320.041 kb on + strand, within Dsui_3101 at 3320.182 kb on - strand at 3320.205 kb on + strand at 3320.250 kb on + strand at 3320.357 kb on + strand, within Dsui_3102 at 3320.392 kb on - strand at 3320.404 kb on - strand at 3320.404 kb on - strand at 3320.570 kb on + strand, within Dsui_3102 at 3320.573 kb on - strand at 3320.683 kb on + strand, within Dsui_3102 at 3320.686 kb on + strand, within Dsui_3102 at 3320.840 kb on - strand at 3320.973 kb on - strand at 3320.973 kb on - strand at 3320.982 kb on - strand at 3321.027 kb on - strand at 3321.079 kb on + strand, within Dsui_3103 at 3321.089 kb on + strand, within Dsui_3103 at 3321.102 kb on + strand, within Dsui_3103 at 3321.110 kb on - strand at 3321.110 kb on - strand, within Dsui_3103 at 3321.112 kb on + strand, within Dsui_3103 at 3321.115 kb on - strand at 3321.136 kb on + strand, within Dsui_3103 at 3321.203 kb on + strand, within Dsui_3103 at 3321.319 kb on - strand, within Dsui_3103 at 3321.337 kb on - strand, within Dsui_3103 at 3321.359 kb on + strand, within Dsui_3103 at 3321.359 kb on + strand, within Dsui_3103 at 3321.372 kb on - strand, within Dsui_3103 at 3321.465 kb on + strand, within Dsui_3103 at 3321.519 kb on - strand, within Dsui_3103 at 3321.643 kb on - strand, within Dsui_3103 at 3321.682 kb on + strand, within Dsui_3103 at 3321.748 kb on + strand, within Dsui_3103
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 3,319,224 + -0.2 3,319,265 - -0.8 3,319,275 + -0.2 3,319,330 + Dsui_3101 0.11 -0.4 3,319,364 + Dsui_3101 0.14 +0.3 3,319,391 + Dsui_3101 0.17 -0.1 3,319,399 - +0.8 3,319,731 + Dsui_3101 0.55 +0.2 3,319,765 + Dsui_3101 0.59 +0.3 3,319,770 + Dsui_3101 0.60 -0.5 3,320,041 + Dsui_3101 0.90 +0.1 3,320,182 - +0.8 3,320,205 + -0.7 3,320,250 + +0.2 3,320,357 + Dsui_3102 0.27 -0.8 3,320,392 - -0.2 3,320,404 - -0.2 3,320,404 - -0.2 3,320,570 + Dsui_3102 0.63 -0.0 3,320,573 - -0.8 3,320,683 + Dsui_3102 0.82 -1.5 3,320,686 + Dsui_3102 0.82 +1.1 3,320,840 - -0.2 3,320,973 - +0.8 3,320,973 - +0.8 3,320,982 - +0.8 3,321,027 - -2.0 3,321,079 + Dsui_3103 0.10 -0.1 3,321,089 + Dsui_3103 0.11 +0.1 3,321,102 + Dsui_3103 0.12 -1.0 3,321,110 - +0.8 3,321,110 - Dsui_3103 0.13 -0.8 3,321,112 + Dsui_3103 0.13 -0.2 3,321,115 - +0.8 3,321,136 + Dsui_3103 0.15 +0.2 3,321,203 + Dsui_3103 0.20 +0.2 3,321,319 - Dsui_3103 0.30 -0.8 3,321,337 - Dsui_3103 0.32 -1.2 3,321,359 + Dsui_3103 0.33 -0.2 3,321,359 + Dsui_3103 0.33 -0.3 3,321,372 - Dsui_3103 0.34 -0.2 3,321,465 + Dsui_3103 0.42 -0.4 3,321,519 - Dsui_3103 0.47 +0.8 3,321,643 - Dsui_3103 0.57 -0.8 3,321,682 + Dsui_3103 0.60 +0.1 3,321,748 + Dsui_3103 0.66 +0.6
Or see this region's nucleotide sequence