Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3075 and Dsui_3076 are separated by 61 nucleotides Dsui_3076 and Dsui_3077 are separated by 65 nucleotides Dsui_3077 and Dsui_3078 are separated by 41 nucleotides
Dsui_3075: Dsui_3075 - ferrochelatase, at 3,290,764 to 3,291,867
_3075
Dsui_3076: Dsui_3076 - thioredoxin, at 3,291,929 to 3,292,372
_3076
Dsui_3077: Dsui_3077 - hypothetical protein, at 3,292,438 to 3,293,505
_3077
Dsui_3078: Dsui_3078 - methyl-accepting chemotaxis protein, at 3,293,547 to 3,295,166
_3078
Position (kb)
3292
3293
3294 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3292.035 kb on - strand, within Dsui_3076 at 3292.042 kb on + strand, within Dsui_3076 at 3292.049 kb on + strand, within Dsui_3076 at 3292.050 kb on - strand, within Dsui_3076 at 3292.076 kb on + strand, within Dsui_3076 at 3292.088 kb on + strand, within Dsui_3076 at 3292.237 kb on + strand, within Dsui_3076 at 3292.245 kb on - strand, within Dsui_3076 at 3292.424 kb on + strand at 3292.432 kb on - strand at 3292.513 kb on - strand at 3292.682 kb on + strand, within Dsui_3077 at 3292.688 kb on + strand, within Dsui_3077 at 3292.690 kb on - strand at 3292.844 kb on + strand, within Dsui_3077 at 3292.861 kb on + strand, within Dsui_3077 at 3292.895 kb on + strand at 3292.913 kb on - strand at 3292.946 kb on + strand, within Dsui_3077 at 3293.027 kb on + strand at 3293.107 kb on + strand, within Dsui_3077 at 3293.149 kb on - strand, within Dsui_3077 at 3293.292 kb on + strand, within Dsui_3077 at 3293.321 kb on + strand, within Dsui_3077 at 3293.346 kb on + strand, within Dsui_3077 at 3293.390 kb on + strand, within Dsui_3077 at 3293.397 kb on + strand, within Dsui_3077 at 3293.439 kb on - strand at 3293.460 kb on + strand at 3293.470 kb on - strand at 3293.500 kb on + strand at 3293.503 kb on - strand at 3293.503 kb on - strand at 3293.520 kb on + strand at 3293.541 kb on - strand at 3293.551 kb on - strand at 3293.599 kb on + strand at 3293.628 kb on - strand at 3293.672 kb on - strand at 3293.721 kb on - strand at 3293.873 kb on + strand, within Dsui_3078 at 3293.873 kb on + strand, within Dsui_3078 at 3293.876 kb on - strand, within Dsui_3078 at 3293.878 kb on + strand, within Dsui_3078 at 3293.909 kb on + strand, within Dsui_3078 at 3293.909 kb on + strand, within Dsui_3078 at 3293.962 kb on + strand, within Dsui_3078 at 3293.980 kb on - strand, within Dsui_3078 at 3293.991 kb on + strand, within Dsui_3078 at 3294.071 kb on + strand, within Dsui_3078 at 3294.409 kb on + strand, within Dsui_3078 at 3294.422 kb on - strand, within Dsui_3078 at 3294.442 kb on - strand, within Dsui_3078
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 3,292,035 - Dsui_3076 0.24 -1.2 3,292,042 + Dsui_3076 0.25 +0.7 3,292,049 + Dsui_3076 0.27 -1.1 3,292,050 - Dsui_3076 0.27 +0.8 3,292,076 + Dsui_3076 0.33 -0.1 3,292,088 + Dsui_3076 0.36 -0.7 3,292,237 + Dsui_3076 0.69 -3.0 3,292,245 - Dsui_3076 0.71 +0.8 3,292,424 + -0.2 3,292,432 - +0.8 3,292,513 - -0.2 3,292,682 + Dsui_3077 0.23 -0.2 3,292,688 + Dsui_3077 0.23 +0.8 3,292,690 - +0.8 3,292,844 + Dsui_3077 0.38 -1.5 3,292,861 + Dsui_3077 0.40 -2.5 3,292,895 + +0.8 3,292,913 - +0.8 3,292,946 + Dsui_3077 0.48 -1.2 3,293,027 + -0.2 3,293,107 + Dsui_3077 0.63 -0.8 3,293,149 - Dsui_3077 0.67 -1.2 3,293,292 + Dsui_3077 0.80 -1.2 3,293,321 + Dsui_3077 0.83 +0.8 3,293,346 + Dsui_3077 0.85 -0.2 3,293,390 + Dsui_3077 0.89 -1.2 3,293,397 + Dsui_3077 0.90 -1.2 3,293,439 - -2.5 3,293,460 + +0.1 3,293,470 - +0.8 3,293,500 + -0.5 3,293,503 - +0.8 3,293,503 - +0.8 3,293,520 + +0.4 3,293,541 - -1.2 3,293,551 - +0.8 3,293,599 + -0.3 3,293,628 - +0.8 3,293,672 - -0.8 3,293,721 - +0.8 3,293,873 + Dsui_3078 0.20 +0.1 3,293,873 + Dsui_3078 0.20 -0.2 3,293,876 - Dsui_3078 0.20 +0.8 3,293,878 + Dsui_3078 0.20 -0.7 3,293,909 + Dsui_3078 0.22 -0.2 3,293,909 + Dsui_3078 0.22 -0.0 3,293,962 + Dsui_3078 0.26 +0.6 3,293,980 - Dsui_3078 0.27 -1.8 3,293,991 + Dsui_3078 0.27 -0.2 3,294,071 + Dsui_3078 0.32 -0.1 3,294,409 + Dsui_3078 0.53 -0.1 3,294,422 - Dsui_3078 0.54 -0.2 3,294,442 - Dsui_3078 0.55 +0.8
Or see this region's nucleotide sequence