Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2802 and Dsui_2803 are separated by 82 nucleotides Dsui_2803 and Dsui_2804 are separated by 42 nucleotides
Dsui_2802: Dsui_2802 - flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family, at 2,973,062 to 2,974,330
_2802
Dsui_2803: Dsui_2803 - GGDEF domain-containing protein, at 2,974,413 to 2,974,898
_2803
Dsui_2804: Dsui_2804 - diguanylate cyclase (GGDEF) domain-containing protein, at 2,974,941 to 2,976,557
_2804
Position (kb)
2974
2975 Strain fitness (log2 ratio)
-2
-1
0
1 at 2973.622 kb on - strand at 2973.859 kb on + strand, within Dsui_2802 at 2973.862 kb on + strand, within Dsui_2802 at 2973.873 kb on + strand, within Dsui_2802 at 2974.063 kb on + strand, within Dsui_2802 at 2974.112 kb on + strand, within Dsui_2802 at 2974.181 kb on + strand, within Dsui_2802 at 2974.210 kb on - strand at 2974.257 kb on - strand at 2974.273 kb on + strand at 2974.277 kb on + strand at 2974.290 kb on + strand at 2974.298 kb on - strand at 2974.408 kb on + strand at 2974.534 kb on + strand, within Dsui_2803 at 2974.536 kb on + strand, within Dsui_2803 at 2974.539 kb on - strand at 2974.561 kb on + strand, within Dsui_2803 at 2974.576 kb on + strand, within Dsui_2803 at 2974.603 kb on + strand, within Dsui_2803 at 2974.686 kb on + strand, within Dsui_2803 at 2974.695 kb on + strand, within Dsui_2803 at 2974.763 kb on - strand, within Dsui_2803 at 2974.777 kb on + strand, within Dsui_2803 at 2974.785 kb on - strand, within Dsui_2803 at 2974.785 kb on - strand, within Dsui_2803 at 2974.800 kb on - strand, within Dsui_2803 at 2974.803 kb on + strand, within Dsui_2803 at 2974.805 kb on - strand, within Dsui_2803 at 2974.863 kb on + strand at 2974.865 kb on - strand at 2975.124 kb on - strand, within Dsui_2804 at 2975.145 kb on + strand, within Dsui_2804 at 2975.205 kb on - strand, within Dsui_2804 at 2975.350 kb on + strand at 2975.358 kb on - strand, within Dsui_2804 at 2975.445 kb on + strand, within Dsui_2804 at 2975.445 kb on + strand at 2975.779 kb on + strand at 2975.793 kb on - strand, within Dsui_2804
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,973,622 - +0.9 2,973,859 + Dsui_2802 0.63 +0.3 2,973,862 + Dsui_2802 0.63 +1.1 2,973,873 + Dsui_2802 0.64 -0.1 2,974,063 + Dsui_2802 0.79 +0.1 2,974,112 + Dsui_2802 0.83 +0.0 2,974,181 + Dsui_2802 0.88 -0.2 2,974,210 - +0.9 2,974,257 - -0.1 2,974,273 + -0.7 2,974,277 + -0.4 2,974,290 + +0.1 2,974,298 - -0.1 2,974,408 + -0.1 2,974,534 + Dsui_2803 0.25 -0.4 2,974,536 + Dsui_2803 0.25 -0.3 2,974,539 - -0.1 2,974,561 + Dsui_2803 0.30 -2.1 2,974,576 + Dsui_2803 0.34 +0.9 2,974,603 + Dsui_2803 0.39 -1.1 2,974,686 + Dsui_2803 0.56 +0.2 2,974,695 + Dsui_2803 0.58 +1.3 2,974,763 - Dsui_2803 0.72 -1.1 2,974,777 + Dsui_2803 0.75 -1.2 2,974,785 - Dsui_2803 0.77 -2.4 2,974,785 - Dsui_2803 0.77 -1.9 2,974,800 - Dsui_2803 0.80 -0.7 2,974,803 + Dsui_2803 0.80 -0.9 2,974,805 - Dsui_2803 0.81 -1.1 2,974,863 + -0.8 2,974,865 - +0.9 2,975,124 - Dsui_2804 0.11 -0.1 2,975,145 + Dsui_2804 0.13 -1.1 2,975,205 - Dsui_2804 0.16 -0.6 2,975,350 + -1.1 2,975,358 - Dsui_2804 0.26 -0.0 2,975,445 + Dsui_2804 0.31 -0.7 2,975,445 + +0.9 2,975,779 + -0.1 2,975,793 - Dsui_2804 0.53 +0.6
Or see this region's nucleotide sequence