Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2764 and Dsui_2765 are separated by 4 nucleotides Dsui_2765 and Dsui_2766 are separated by 79 nucleotides Dsui_2766 and Dsui_2767 are separated by 67 nucleotides Dsui_2767 and Dsui_2768 are separated by 109 nucleotides
Dsui_2764: Dsui_2764 - hypothetical protein, at 2,923,217 to 2,923,468
_2764
Dsui_2765: Dsui_2765 - putative membrane protein, at 2,923,473 to 2,924,222
_2765
Dsui_2766: Dsui_2766 - putative homoserine kinase type II (protein kinase fold), at 2,924,302 to 2,925,309
_2766
Dsui_2767: Dsui_2767 - glutaredoxin-like protein, at 2,925,377 to 2,925,763
_2767
Dsui_2768: Dsui_2768 - uncharacterized protein involved in outer membrane biogenesis, at 2,925,873 to 2,926,982
_2768
Position (kb)
2924
2925
2926 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2923.370 kb on - strand, within Dsui_2764 at 2923.493 kb on + strand at 2923.501 kb on - strand at 2923.510 kb on + strand at 2923.511 kb on - strand at 2923.555 kb on + strand, within Dsui_2765 at 2923.597 kb on + strand, within Dsui_2765 at 2923.696 kb on - strand, within Dsui_2765 at 2923.788 kb on - strand, within Dsui_2765 at 2923.799 kb on - strand, within Dsui_2765 at 2923.822 kb on + strand, within Dsui_2765 at 2923.887 kb on + strand, within Dsui_2765 at 2924.057 kb on + strand, within Dsui_2765 at 2924.139 kb on - strand, within Dsui_2765 at 2924.139 kb on - strand, within Dsui_2765 at 2924.159 kb on + strand at 2924.209 kb on - strand at 2924.270 kb on + strand at 2924.326 kb on + strand at 2924.484 kb on + strand, within Dsui_2766 at 2924.610 kb on - strand at 2924.784 kb on + strand, within Dsui_2766 at 2924.868 kb on - strand at 2924.944 kb on + strand, within Dsui_2766 at 2925.008 kb on + strand, within Dsui_2766 at 2925.107 kb on + strand, within Dsui_2766 at 2925.210 kb on + strand at 2925.233 kb on + strand at 2925.290 kb on + strand at 2925.290 kb on + strand at 2925.290 kb on + strand at 2925.305 kb on + strand at 2925.313 kb on - strand at 2925.362 kb on + strand at 2925.370 kb on - strand at 2925.475 kb on + strand at 2925.503 kb on + strand, within Dsui_2767 at 2925.565 kb on + strand, within Dsui_2767 at 2925.565 kb on + strand, within Dsui_2767 at 2925.575 kb on + strand, within Dsui_2767 at 2925.575 kb on + strand, within Dsui_2767 at 2925.583 kb on - strand at 2925.916 kb on + strand at 2925.918 kb on - strand at 2925.990 kb on + strand, within Dsui_2768 at 2926.030 kb on + strand, within Dsui_2768 at 2926.097 kb on + strand, within Dsui_2768 at 2926.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,923,370 - Dsui_2764 0.61 +0.9 2,923,493 + +0.9 2,923,501 - -2.1 2,923,510 + -2.6 2,923,511 - +0.9 2,923,555 + Dsui_2765 0.11 -0.1 2,923,597 + Dsui_2765 0.17 +1.9 2,923,696 - Dsui_2765 0.30 +0.9 2,923,788 - Dsui_2765 0.42 -1.1 2,923,799 - Dsui_2765 0.43 +0.9 2,923,822 + Dsui_2765 0.47 -0.7 2,923,887 + Dsui_2765 0.55 +0.9 2,924,057 + Dsui_2765 0.78 -0.1 2,924,139 - Dsui_2765 0.89 -0.1 2,924,139 - Dsui_2765 0.89 +0.9 2,924,159 + +0.9 2,924,209 - -0.4 2,924,270 + -0.1 2,924,326 + -0.7 2,924,484 + Dsui_2766 0.18 -1.7 2,924,610 - +0.9 2,924,784 + Dsui_2766 0.48 +0.9 2,924,868 - -0.1 2,924,944 + Dsui_2766 0.64 +0.9 2,925,008 + Dsui_2766 0.70 -0.7 2,925,107 + Dsui_2766 0.80 -1.1 2,925,210 + +0.9 2,925,233 + -0.1 2,925,290 + -0.1 2,925,290 + +0.9 2,925,290 + -0.1 2,925,305 + +0.4 2,925,313 - -1.4 2,925,362 + -2.1 2,925,370 - +0.9 2,925,475 + -0.1 2,925,503 + Dsui_2767 0.33 -0.1 2,925,565 + Dsui_2767 0.49 -0.7 2,925,565 + Dsui_2767 0.49 -0.7 2,925,575 + Dsui_2767 0.51 +0.9 2,925,575 + Dsui_2767 0.51 -0.7 2,925,583 - +0.9 2,925,916 + +0.9 2,925,918 - -0.7 2,925,990 + Dsui_2768 0.11 +0.9 2,926,030 + Dsui_2768 0.14 -1.1 2,926,097 + Dsui_2768 0.20 -1.1 2,926,271 - +0.9
Or see this region's nucleotide sequence