Strain Fitness in Dechlorosoma suillum PS around Dsui_2645

Experiment: ALP with Fusidic 0.007 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2643 and Dsui_2644 are separated by 179 nucleotidesDsui_2644 and Dsui_2645 overlap by 4 nucleotidesDsui_2645 and Dsui_2646 are separated by 123 nucleotides Dsui_2643: Dsui_2643 - hypothetical protein, at 2,795,620 to 2,795,895 _2643 Dsui_2644: Dsui_2644 - heavy metal response regulator, at 2,796,075 to 2,796,752 _2644 Dsui_2645: Dsui_2645 - heavy metal sensor kinase, at 2,796,749 to 2,798,149 _2645 Dsui_2646: Dsui_2646 - AAA+ family ATPase, at 2,798,273 to 2,799,445 _2646 Position (kb) 2796 2797 2798 2799Strain fitness (log2 ratio) -2 -1 0 1 2at 2795.797 kb on + strandat 2795.939 kb on - strandat 2795.968 kb on + strandat 2795.977 kb on + strandat 2796.126 kb on - strandat 2796.213 kb on - strand, within Dsui_2644at 2796.234 kb on - strandat 2796.302 kb on + strand, within Dsui_2644at 2796.302 kb on + strand, within Dsui_2644at 2796.379 kb on - strandat 2796.407 kb on + strand, within Dsui_2644at 2796.601 kb on + strand, within Dsui_2644at 2796.616 kb on - strand, within Dsui_2644at 2796.725 kb on + strandat 2796.728 kb on - strandat 2796.732 kb on + strandat 2796.831 kb on - strandat 2797.037 kb on + strand, within Dsui_2645at 2797.171 kb on + strand, within Dsui_2645at 2797.231 kb on + strand, within Dsui_2645at 2797.231 kb on + strand, within Dsui_2645at 2797.458 kb on - strand, within Dsui_2645at 2797.575 kb on + strand, within Dsui_2645at 2797.701 kb on + strand, within Dsui_2645at 2797.817 kb on + strand, within Dsui_2645at 2797.841 kb on + strand, within Dsui_2645at 2797.846 kb on + strand, within Dsui_2645at 2797.853 kb on + strand, within Dsui_2645at 2797.963 kb on + strand, within Dsui_2645at 2798.004 kb on + strand, within Dsui_2645at 2798.004 kb on + strand, within Dsui_2645at 2798.004 kb on + strand, within Dsui_2645at 2798.004 kb on + strand, within Dsui_2645at 2798.084 kb on + strandat 2798.131 kb on + strandat 2798.131 kb on + strandat 2798.131 kb on + strandat 2798.136 kb on + strandat 2798.136 kb on + strandat 2798.184 kb on + strandat 2798.189 kb on + strandat 2798.194 kb on + strandat 2798.194 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml
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2,795,797 + +0.8
2,795,939 - -0.8
2,795,968 + +0.8
2,795,977 + +0.8
2,796,126 - -0.2
2,796,213 - Dsui_2644 0.20 -0.2
2,796,234 - +0.8
2,796,302 + Dsui_2644 0.33 -1.2
2,796,302 + Dsui_2644 0.33 +0.8
2,796,379 - -0.8
2,796,407 + Dsui_2644 0.49 +0.8
2,796,601 + Dsui_2644 0.78 -1.6
2,796,616 - Dsui_2644 0.80 -1.6
2,796,725 + +0.8
2,796,728 - +0.8
2,796,732 + +0.8
2,796,831 - +0.8
2,797,037 + Dsui_2645 0.21 +0.8
2,797,171 + Dsui_2645 0.30 -2.0
2,797,231 + Dsui_2645 0.34 +0.8
2,797,231 + Dsui_2645 0.34 +0.8
2,797,458 - Dsui_2645 0.51 -0.2
2,797,575 + Dsui_2645 0.59 -0.8
2,797,701 + Dsui_2645 0.68 +0.8
2,797,817 + Dsui_2645 0.76 -1.6
2,797,841 + Dsui_2645 0.78 -1.2
2,797,846 + Dsui_2645 0.78 -0.2
2,797,853 + Dsui_2645 0.79 -1.8
2,797,963 + Dsui_2645 0.87 +0.8
2,798,004 + Dsui_2645 0.90 -0.1
2,798,004 + Dsui_2645 0.90 +1.8
2,798,004 + Dsui_2645 0.90 -0.2
2,798,004 + Dsui_2645 0.90 -1.5
2,798,084 + +0.8
2,798,131 + -0.2
2,798,131 + +0.8
2,798,131 + +0.8
2,798,136 + -0.2
2,798,136 + +0.8
2,798,184 + -0.2
2,798,189 + -0.8
2,798,194 + -1.6
2,798,194 + +0.8

Or see this region's nucleotide sequence