Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2542 and Dsui_2543 are separated by 11 nucleotides Dsui_2543 and Dsui_2544 are separated by 153 nucleotides Dsui_2544 and Dsui_2545 are separated by 14 nucleotides Dsui_2545 and Dsui_2546 are separated by 27 nucleotides
Dsui_2542: Dsui_2542 - FAD/FMN-dependent dehydrogenase, at 2,693,762 to 2,695,168
_2542
Dsui_2543: Dsui_2543 - hypothetical protein, at 2,695,180 to 2,695,383
_2543
Dsui_2544: Dsui_2544 - disulfide bond chaperone, at 2,695,537 to 2,696,394
_2544
Dsui_2545: Dsui_2545 - transcriptional regulator, Spx/MgsR family, at 2,696,409 to 2,696,756
_2545
Dsui_2546: Dsui_2546 - transcriptional accessory protein, at 2,696,784 to 2,699,099
_2546
Position (kb)
2695
2696
2697 Strain fitness (log2 ratio)
-1
0
1 at 2695.332 kb on + strand, within Dsui_2543 at 2695.388 kb on - strand at 2695.411 kb on - strand at 2695.500 kb on + strand at 2695.508 kb on - strand at 2695.567 kb on - strand at 2695.706 kb on - strand, within Dsui_2544 at 2695.718 kb on - strand, within Dsui_2544 at 2695.750 kb on - strand, within Dsui_2544 at 2695.757 kb on - strand, within Dsui_2544 at 2695.865 kb on + strand at 2695.919 kb on - strand, within Dsui_2544 at 2696.053 kb on + strand, within Dsui_2544 at 2696.120 kb on + strand, within Dsui_2544 at 2696.204 kb on - strand, within Dsui_2544 at 2696.379 kb on + strand at 2696.503 kb on - strand, within Dsui_2545 at 2696.532 kb on - strand, within Dsui_2545 at 2696.589 kb on - strand, within Dsui_2545 at 2696.693 kb on + strand, within Dsui_2545 at 2696.741 kb on + strand at 2696.746 kb on + strand at 2696.746 kb on + strand at 2696.747 kb on + strand at 2696.804 kb on + strand at 2697.003 kb on - strand at 2697.088 kb on - strand, within Dsui_2546 at 2697.242 kb on - strand, within Dsui_2546 at 2697.289 kb on + strand, within Dsui_2546 at 2697.370 kb on + strand, within Dsui_2546
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,695,332 + Dsui_2543 0.75 -1.2 2,695,388 - -0.1 2,695,411 - -0.2 2,695,500 + +0.8 2,695,508 - -0.3 2,695,567 - -0.1 2,695,706 - Dsui_2544 0.20 +0.2 2,695,718 - Dsui_2544 0.21 +0.4 2,695,750 - Dsui_2544 0.25 +0.6 2,695,757 - Dsui_2544 0.26 +1.2 2,695,865 + +0.8 2,695,919 - Dsui_2544 0.45 +0.4 2,696,053 + Dsui_2544 0.60 +0.8 2,696,120 + Dsui_2544 0.68 +0.8 2,696,204 - Dsui_2544 0.78 +0.9 2,696,379 + -1.2 2,696,503 - Dsui_2545 0.27 -0.5 2,696,532 - Dsui_2545 0.35 -0.1 2,696,589 - Dsui_2545 0.52 -1.2 2,696,693 + Dsui_2545 0.82 +0.8 2,696,741 + -0.2 2,696,746 + +0.8 2,696,746 + +0.8 2,696,747 + +0.8 2,696,804 + -1.2 2,697,003 - +0.0 2,697,088 - Dsui_2546 0.13 -0.5 2,697,242 - Dsui_2546 0.20 -0.1 2,697,289 + Dsui_2546 0.22 +0.8 2,697,370 + Dsui_2546 0.25 +0.8
Or see this region's nucleotide sequence