Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2350 and Dsui_2351 overlap by 50 nucleotides Dsui_2351 and Dsui_2352 are separated by 121 nucleotides Dsui_2352 and Dsui_2353 are separated by 6 nucleotides
Dsui_2350: Dsui_2350 - putative transcriptional regulator, at 2,503,453 to 2,503,917
_2350
Dsui_2351: Dsui_2351 - uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein, at 2,503,868 to 2,504,242
_2351
Dsui_2352: Dsui_2352 - hypothetical protein, at 2,504,364 to 2,505,068
_2352
Dsui_2353: Dsui_2353 - transcriptional regulator, at 2,505,075 to 2,505,974
_2353
Position (kb)
2504
2505
2506 Strain fitness (log2 ratio)
-2
-1
0
1 at 2503.515 kb on + strand, within Dsui_2350 at 2503.539 kb on + strand at 2503.681 kb on + strand, within Dsui_2350 at 2503.725 kb on + strand at 2503.812 kb on + strand at 2503.951 kb on + strand at 2504.091 kb on + strand at 2504.091 kb on + strand at 2504.126 kb on + strand at 2504.136 kb on + strand at 2504.379 kb on + strand at 2504.615 kb on - strand at 2504.677 kb on + strand at 2504.853 kb on + strand, within Dsui_2352 at 2504.867 kb on + strand, within Dsui_2352 at 2504.869 kb on - strand, within Dsui_2352 at 2504.889 kb on + strand, within Dsui_2352 at 2504.889 kb on + strand at 2504.906 kb on + strand at 2504.961 kb on + strand, within Dsui_2352 at 2504.984 kb on + strand at 2504.996 kb on + strand, within Dsui_2352 at 2505.012 kb on + strand at 2505.335 kb on + strand at 2505.368 kb on + strand, within Dsui_2353 at 2505.368 kb on + strand, within Dsui_2353 at 2505.368 kb on + strand, within Dsui_2353 at 2505.376 kb on - strand, within Dsui_2353 at 2505.404 kb on - strand, within Dsui_2353 at 2505.435 kb on + strand at 2505.468 kb on + strand at 2505.470 kb on - strand, within Dsui_2353 at 2505.483 kb on - strand, within Dsui_2353 at 2505.506 kb on - strand, within Dsui_2353 at 2505.565 kb on + strand, within Dsui_2353 at 2505.610 kb on - strand, within Dsui_2353 at 2505.610 kb on - strand, within Dsui_2353 at 2505.688 kb on + strand, within Dsui_2353 at 2505.696 kb on - strand, within Dsui_2353 at 2505.696 kb on - strand, within Dsui_2353 at 2505.704 kb on + strand at 2505.715 kb on + strand, within Dsui_2353 at 2505.730 kb on - strand, within Dsui_2353 at 2505.884 kb on + strand, within Dsui_2353 at 2505.892 kb on - strand at 2505.930 kb on + strand at 2505.994 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,503,515 + Dsui_2350 0.13 +1.7 2,503,539 + +0.7 2,503,681 + Dsui_2350 0.49 -0.8 2,503,725 + +0.7 2,503,812 + +0.7 2,503,951 + -0.8 2,504,091 + +0.7 2,504,091 + -0.3 2,504,126 + -0.3 2,504,136 + +0.7 2,504,379 + +0.7 2,504,615 - +0.7 2,504,677 + -0.3 2,504,853 + Dsui_2352 0.69 -1.3 2,504,867 + Dsui_2352 0.71 -0.8 2,504,869 - Dsui_2352 0.72 -1.8 2,504,889 + Dsui_2352 0.74 -0.8 2,504,889 + +0.7 2,504,906 + -0.3 2,504,961 + Dsui_2352 0.85 -1.6 2,504,984 + +0.7 2,504,996 + Dsui_2352 0.90 -0.3 2,505,012 + -0.8 2,505,335 + +0.7 2,505,368 + Dsui_2353 0.33 -0.3 2,505,368 + Dsui_2353 0.33 -0.3 2,505,368 + Dsui_2353 0.33 +0.7 2,505,376 - Dsui_2353 0.33 -1.5 2,505,404 - Dsui_2353 0.37 +0.3 2,505,435 + -1.3 2,505,468 + -0.3 2,505,470 - Dsui_2353 0.44 -0.9 2,505,483 - Dsui_2353 0.45 -0.7 2,505,506 - Dsui_2353 0.48 -0.2 2,505,565 + Dsui_2353 0.54 -0.3 2,505,610 - Dsui_2353 0.59 -0.5 2,505,610 - Dsui_2353 0.59 -0.3 2,505,688 + Dsui_2353 0.68 -0.3 2,505,696 - Dsui_2353 0.69 -0.0 2,505,696 - Dsui_2353 0.69 -0.2 2,505,704 + -0.3 2,505,715 + Dsui_2353 0.71 -0.3 2,505,730 - Dsui_2353 0.73 +0.2 2,505,884 + Dsui_2353 0.90 -1.6 2,505,892 - -0.4 2,505,930 + +0.7 2,505,994 - +0.2
Or see this region's nucleotide sequence