Strain Fitness in Dechlorosoma suillum PS around Dsui_2330
Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.007 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,482,628 | + | +0.8 | |||
2,482,671 | + | -0.2 | |||
2,482,679 | - | -0.2 | |||
2,482,795 | - | Dsui_2329 | 0.45 | -0.5 | |
2,482,822 | + | +0.8 | |||
2,482,971 | + | +0.8 | |||
2,482,990 | + | +0.8 | |||
2,483,082 | - | +0.8 | |||
2,483,176 | - | Dsui_2329 | 0.79 | -1.2 | |
2,483,196 | - | Dsui_2329 | 0.81 | +0.8 | |
2,483,196 | - | +0.8 | |||
2,483,196 | - | Dsui_2329 | 0.81 | -0.8 | |
2,483,198 | + | -0.2 | |||
2,483,475 | - | -0.8 | |||
2,483,559 | - | +0.8 | |||
2,483,630 | - | +0.8 | |||
2,483,641 | - | +0.8 | |||
2,483,691 | + | Dsui_2330 | 0.17 | +0.8 | |
2,483,755 | + | Dsui_2330 | 0.25 | -1.6 | |
2,483,780 | + | Dsui_2330 | 0.28 | +0.0 | |
2,483,788 | - | +0.8 | |||
2,483,788 | - | Dsui_2330 | 0.29 | -1.2 | |
2,483,986 | - | +0.8 | |||
2,484,055 | + | -0.2 | |||
2,484,129 | - | Dsui_2330 | 0.69 | -1.8 | |
2,484,228 | + | Dsui_2330 | 0.80 | -1.6 | |
2,484,376 | + | +0.5 | |||
2,484,387 | - | +0.8 | |||
2,484,591 | + | -1.8 | |||
2,484,599 | - | +1.2 | |||
2,484,599 | - | +0.8 | |||
2,484,996 | - | Dsui_2331 | 0.44 | +0.8 | |
2,485,093 | + | -1.2 | |||
2,485,167 | - | Dsui_2331 | 0.59 | -0.2 | |
2,485,209 | + | Dsui_2331 | 0.62 | +0.8 | |
2,485,243 | - | Dsui_2331 | 0.65 | -0.5 |
Or see this region's nucleotide sequence