Strain Fitness in Dechlorosoma suillum PS around Dsui_2312
Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.007 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,466,827 | - | Dsui_2310 | 0.83 | -1.6 | |
2,466,852 | + | Dsui_2310 | 0.85 | +0.7 | |
2,466,917 | + | -1.3 | |||
2,466,946 | + | -0.9 | |||
2,467,049 | + | +0.4 | |||
2,467,059 | + | +2.1 | |||
2,467,064 | + | -0.9 | |||
2,467,128 | + | Dsui_2311 | 0.14 | -0.3 | |
2,467,131 | - | -0.9 | |||
2,467,169 | - | Dsui_2311 | 0.21 | -1.9 | |
2,467,398 | - | -0.3 | |||
2,467,553 | + | -0.9 | |||
2,467,563 | + | +1.7 | |||
2,467,571 | - | +0.7 | |||
2,467,787 | + | -0.3 | |||
2,468,130 | + | Dsui_2312 | 0.42 | -0.9 | |
2,468,138 | + | Dsui_2312 | 0.43 | -1.9 | |
2,468,287 | + | Dsui_2312 | 0.62 | -0.9 | |
2,468,319 | - | +0.7 | |||
2,468,336 | - | -0.3 | |||
2,468,410 | + | Dsui_2312 | 0.77 | -1.9 | |
2,468,410 | + | +0.7 | |||
2,468,410 | + | Dsui_2312 | 0.77 | -0.9 | |
2,468,410 | - | +0.7 | |||
2,468,410 | - | -0.9 | |||
2,468,425 | + | Dsui_2312 | 0.79 | -0.9 | |
2,468,591 | + | +0.7 | |||
2,468,596 | + | -0.9 | |||
2,468,609 | - | -1.9 | |||
2,468,720 | + | -2.4 |
Or see this region's nucleotide sequence