Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2198 and Dsui_2199 are separated by 161 nucleotides Dsui_2199 and Dsui_2200 are separated by 28 nucleotides Dsui_2200 and Dsui_2201 are separated by 25 nucleotides Dsui_2201 and Dsui_2202 are separated by 68 nucleotides
Dsui_2198: Dsui_2198 - ATP-dependent protease La, at 2,334,072 to 2,336,489
_2198
Dsui_2199: Dsui_2199 - bacterial nucleoid DNA-binding protein, at 2,336,651 to 2,336,923
_2199
Dsui_2200: Dsui_2200 - tRNA-Val, at 2,336,952 to 2,337,027
_2200
Dsui_2201: Dsui_2201 - tRNA-Asp, at 2,337,053 to 2,337,129
_2201
Dsui_2202: Dsui_2202 - parvulin-like peptidyl-prolyl isomerase, at 2,337,198 to 2,339,090
_2202
Position (kb)
2337
2338 Strain fitness (log2 ratio)
-1
0
1
2 at 2336.285 kb on - strand at 2336.305 kb on - strand at 2336.607 kb on + strand at 2336.630 kb on + strand at 2336.637 kb on - strand at 2336.772 kb on + strand, within Dsui_2199 at 2336.900 kb on + strand at 2337.048 kb on + strand at 2337.351 kb on - strand at 2337.365 kb on + strand at 2337.365 kb on + strand at 2337.365 kb on + strand at 2337.397 kb on - strand, within Dsui_2202 at 2337.397 kb on - strand at 2337.397 kb on - strand, within Dsui_2202 at 2337.400 kb on + strand, within Dsui_2202 at 2337.416 kb on - strand at 2337.575 kb on + strand, within Dsui_2202 at 2337.616 kb on - strand, within Dsui_2202 at 2337.803 kb on + strand, within Dsui_2202 at 2337.804 kb on + strand, within Dsui_2202 at 2337.809 kb on + strand, within Dsui_2202 at 2337.811 kb on - strand, within Dsui_2202 at 2337.812 kb on - strand, within Dsui_2202 at 2337.817 kb on - strand at 2337.822 kb on - strand, within Dsui_2202 at 2337.896 kb on + strand, within Dsui_2202 at 2338.051 kb on - strand at 2338.055 kb on + strand, within Dsui_2202 at 2338.077 kb on + strand, within Dsui_2202 at 2338.078 kb on - strand, within Dsui_2202
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,336,285 - -0.7 2,336,305 - +0.9 2,336,607 + +0.6 2,336,630 + +0.6 2,336,637 - +0.9 2,336,772 + Dsui_2199 0.44 +0.6 2,336,900 + +0.7 2,337,048 + +1.0 2,337,351 - +0.9 2,337,365 + +1.2 2,337,365 + +1.4 2,337,365 + +0.5 2,337,397 - Dsui_2202 0.11 -0.1 2,337,397 - +0.9 2,337,397 - Dsui_2202 0.11 -1.1 2,337,400 + Dsui_2202 0.11 +0.2 2,337,416 - +0.9 2,337,575 + Dsui_2202 0.20 +0.5 2,337,616 - Dsui_2202 0.22 +0.9 2,337,803 + Dsui_2202 0.32 -0.2 2,337,804 + Dsui_2202 0.32 +0.5 2,337,809 + Dsui_2202 0.32 +1.1 2,337,811 - Dsui_2202 0.32 +0.9 2,337,812 - Dsui_2202 0.32 -0.1 2,337,817 - +0.9 2,337,822 - Dsui_2202 0.33 -0.7 2,337,896 + Dsui_2202 0.37 -0.1 2,338,051 - -0.1 2,338,055 + Dsui_2202 0.45 +1.9 2,338,077 + Dsui_2202 0.46 +0.3 2,338,078 - Dsui_2202 0.46 +0.9
Or see this region's nucleotide sequence