Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2189 and Dsui_2190 are separated by 316 nucleotides Dsui_2190 and Dsui_2191 are separated by 10 nucleotides Dsui_2191 and Dsui_2192 overlap by 16 nucleotides Dsui_2192 and Dsui_2193 are separated by 10 nucleotides
Dsui_2189: Dsui_2189 - acyl-CoA synthetase (NDP forming), at 2,323,771 to 2,326,461
_2189
Dsui_2190: Dsui_2190 - Tellurite resistance protein TehB, at 2,326,778 to 2,327,332
_2190
Dsui_2191: Dsui_2191 - squalene-associated FAD-dependent desaturase, at 2,327,343 to 2,328,680
_2191
Dsui_2192: Dsui_2192 - squalene synthase HpnD, at 2,328,665 to 2,329,498
_2192
Dsui_2193: Dsui_2193 - squalene synthase HpnC, at 2,329,509 to 2,330,333
_2193
Position (kb)
2327
2328
2329 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2326.456 kb on + strand at 2326.584 kb on + strand at 2326.773 kb on - strand at 2326.842 kb on - strand at 2326.842 kb on - strand at 2327.039 kb on - strand at 2327.071 kb on + strand at 2327.088 kb on + strand, within Dsui_2190 at 2327.111 kb on + strand, within Dsui_2190 at 2327.135 kb on - strand at 2327.294 kb on + strand at 2327.334 kb on - strand at 2327.334 kb on - strand at 2327.334 kb on - strand at 2327.359 kb on - strand at 2327.583 kb on + strand, within Dsui_2191 at 2327.598 kb on - strand, within Dsui_2191 at 2327.603 kb on - strand at 2327.627 kb on - strand, within Dsui_2191 at 2327.649 kb on + strand, within Dsui_2191 at 2328.155 kb on + strand at 2328.336 kb on - strand, within Dsui_2191 at 2328.487 kb on - strand at 2328.519 kb on - strand, within Dsui_2191 at 2328.519 kb on - strand at 2328.728 kb on - strand at 2328.742 kb on + strand at 2328.772 kb on + strand at 2328.797 kb on - strand, within Dsui_2192 at 2328.797 kb on - strand, within Dsui_2192 at 2328.853 kb on - strand, within Dsui_2192 at 2328.861 kb on + strand at 2329.108 kb on - strand, within Dsui_2192 at 2329.116 kb on - strand, within Dsui_2192 at 2329.123 kb on + strand, within Dsui_2192 at 2329.131 kb on - strand, within Dsui_2192 at 2329.177 kb on + strand at 2329.186 kb on - strand, within Dsui_2192 at 2329.248 kb on + strand, within Dsui_2192 at 2329.255 kb on - strand, within Dsui_2192 at 2329.276 kb on - strand, within Dsui_2192 at 2329.292 kb on - strand, within Dsui_2192 at 2329.406 kb on - strand, within Dsui_2192 at 2329.600 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,326,456 + -0.1 2,326,584 + -0.7 2,326,773 - -0.1 2,326,842 - +0.9 2,326,842 - -0.1 2,327,039 - +0.9 2,327,071 + -0.1 2,327,088 + Dsui_2190 0.56 +0.9 2,327,111 + Dsui_2190 0.60 -1.4 2,327,135 - +0.9 2,327,294 + -0.7 2,327,334 - +0.9 2,327,334 - +0.9 2,327,334 - +0.9 2,327,359 - +0.9 2,327,583 + Dsui_2191 0.18 -0.1 2,327,598 - Dsui_2191 0.19 -0.7 2,327,603 - +3.2 2,327,627 - Dsui_2191 0.21 -1.1 2,327,649 + Dsui_2191 0.23 +2.9 2,328,155 + -1.1 2,328,336 - Dsui_2191 0.74 -0.1 2,328,487 - -0.1 2,328,519 - Dsui_2191 0.88 +0.9 2,328,519 - -0.1 2,328,728 - +1.8 2,328,742 + -0.7 2,328,772 + -0.1 2,328,797 - Dsui_2192 0.16 +3.0 2,328,797 - Dsui_2192 0.16 +2.1 2,328,853 - Dsui_2192 0.23 +2.5 2,328,861 + -0.1 2,329,108 - Dsui_2192 0.53 +2.8 2,329,116 - Dsui_2192 0.54 +1.7 2,329,123 + Dsui_2192 0.55 +0.9 2,329,131 - Dsui_2192 0.56 +3.3 2,329,177 + -0.1 2,329,186 - Dsui_2192 0.62 +3.5 2,329,248 + Dsui_2192 0.70 -1.1 2,329,255 - Dsui_2192 0.71 +3.3 2,329,276 - Dsui_2192 0.73 +2.1 2,329,292 - Dsui_2192 0.75 +2.1 2,329,406 - Dsui_2192 0.89 +1.0 2,329,600 + +0.9
Or see this region's nucleotide sequence