Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2095 and Dsui_2096 are separated by 286 nucleotides Dsui_2096 and Dsui_2097 are separated by 131 nucleotides
Dsui_2095: Dsui_2095 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,219,486 to 2,220,172
_2095
Dsui_2096: Dsui_2096 - methyl-accepting chemotaxis protein, at 2,220,459 to 2,222,066
_2096
Dsui_2097: Dsui_2097 - putative phosphohydrolase, at 2,222,198 to 2,223,391
_2097
Position (kb)
2220
2221
2222
2223 Strain fitness (log2 ratio)
-2
-1
0
1 at 2219.491 kb on + strand at 2219.491 kb on + strand at 2219.533 kb on + strand at 2219.671 kb on - strand at 2219.778 kb on + strand, within Dsui_2095 at 2219.782 kb on + strand, within Dsui_2095 at 2219.946 kb on + strand at 2220.064 kb on - strand at 2220.161 kb on + strand at 2220.211 kb on + strand at 2220.316 kb on - strand at 2220.431 kb on - strand at 2220.451 kb on - strand at 2220.484 kb on + strand at 2220.676 kb on - strand, within Dsui_2096 at 2220.712 kb on + strand, within Dsui_2096 at 2220.734 kb on + strand, within Dsui_2096 at 2220.741 kb on + strand at 2220.772 kb on + strand, within Dsui_2096 at 2220.869 kb on + strand, within Dsui_2096 at 2220.931 kb on - strand, within Dsui_2096 at 2220.987 kb on + strand, within Dsui_2096 at 2221.080 kb on + strand, within Dsui_2096 at 2221.133 kb on + strand, within Dsui_2096 at 2221.165 kb on + strand, within Dsui_2096 at 2221.247 kb on + strand, within Dsui_2096 at 2221.247 kb on + strand, within Dsui_2096 at 2221.254 kb on - strand, within Dsui_2096 at 2221.255 kb on - strand, within Dsui_2096 at 2221.322 kb on + strand, within Dsui_2096 at 2221.351 kb on + strand, within Dsui_2096 at 2221.701 kb on + strand, within Dsui_2096 at 2221.818 kb on + strand, within Dsui_2096 at 2222.257 kb on + strand at 2222.282 kb on + strand at 2222.366 kb on - strand, within Dsui_2097 at 2222.371 kb on - strand, within Dsui_2097 at 2222.443 kb on - strand, within Dsui_2097 at 2222.504 kb on + strand, within Dsui_2097 at 2222.629 kb on + strand at 2222.634 kb on + strand, within Dsui_2097 at 2222.642 kb on - strand at 2222.710 kb on - strand, within Dsui_2097 at 2222.928 kb on + strand at 2222.935 kb on - strand, within Dsui_2097
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 2,219,491 + +1.0 2,219,491 + -0.0 2,219,533 + +0.3 2,219,671 - +1.0 2,219,778 + Dsui_2095 0.43 +1.0 2,219,782 + Dsui_2095 0.43 -0.6 2,219,946 + +1.0 2,220,064 - +1.0 2,220,161 + +0.4 2,220,211 + -2.3 2,220,316 - +1.0 2,220,431 - -0.6 2,220,451 - -0.0 2,220,484 + -1.3 2,220,676 - Dsui_2096 0.13 +1.0 2,220,712 + Dsui_2096 0.16 +1.0 2,220,734 + Dsui_2096 0.17 +1.0 2,220,741 + +1.0 2,220,772 + Dsui_2096 0.19 -2.5 2,220,869 + Dsui_2096 0.25 -1.3 2,220,931 - Dsui_2096 0.29 -2.2 2,220,987 + Dsui_2096 0.33 -1.0 2,221,080 + Dsui_2096 0.39 +1.0 2,221,133 + Dsui_2096 0.42 -0.6 2,221,165 + Dsui_2096 0.44 +1.0 2,221,247 + Dsui_2096 0.49 -1.6 2,221,247 + Dsui_2096 0.49 -2.0 2,221,254 - Dsui_2096 0.49 +1.0 2,221,255 - Dsui_2096 0.50 -1.3 2,221,322 + Dsui_2096 0.54 -1.3 2,221,351 + Dsui_2096 0.55 -1.3 2,221,701 + Dsui_2096 0.77 +1.0 2,221,818 + Dsui_2096 0.85 -0.4 2,222,257 + +1.0 2,222,282 + -0.6 2,222,366 - Dsui_2097 0.14 -0.6 2,222,371 - Dsui_2097 0.14 +1.0 2,222,443 - Dsui_2097 0.21 +1.0 2,222,504 + Dsui_2097 0.26 -0.0 2,222,629 + +1.0 2,222,634 + Dsui_2097 0.37 -1.0 2,222,642 - -0.0 2,222,710 - Dsui_2097 0.43 -0.6 2,222,928 + +1.0 2,222,935 - Dsui_2097 0.62 +1.0
Or see this region's nucleotide sequence