Strain Fitness in Dechlorosoma suillum PS around Dsui_1857
Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,950,342 | + | -0.1 | |||
1,950,521 | + | -0.1 | |||
1,950,589 | + | Dsui_1855 | 0.67 | -0.7 | |
1,950,590 | - | -0.7 | |||
1,950,630 | - | -0.1 | |||
1,950,637 | + | Dsui_1855 | 0.72 | -2.5 | |
1,950,675 | - | +0.9 | |||
1,950,739 | - | +0.9 | |||
1,950,815 | - | -1.1 | |||
1,951,000 | - | -0.1 | |||
1,951,074 | - | +0.9 | |||
1,951,182 | + | Dsui_1856 | 0.84 | -0.1 | |
1,951,227 | - | -0.1 | |||
1,951,368 | - | Dsui_1857 | 0.18 | -2.8 | |
1,951,376 | - | -0.7 | |||
1,951,385 | + | -0.1 | |||
1,951,440 | - | +0.9 | |||
1,951,536 | + | -0.7 | |||
1,951,544 | - | Dsui_1857 | 0.38 | +0.9 | |
1,951,572 | - | Dsui_1857 | 0.41 | -1.5 | |
1,951,611 | + | Dsui_1857 | 0.45 | -0.7 | |
1,951,845 | + | -0.1 | |||
1,951,896 | - | -0.1 | |||
1,952,017 | + | -0.1 | |||
1,952,268 | + | +0.1 | |||
1,952,342 | + | -0.8 | |||
1,952,342 | + | +0.6 | |||
1,952,729 | + | Dsui_1858 | 0.53 | -0.2 | |
1,952,737 | - | -0.1 | |||
1,952,784 | + | Dsui_1858 | 0.60 | +0.3 | |
1,952,792 | - | Dsui_1858 | 0.61 | -0.1 | |
1,952,825 | + | Dsui_1858 | 0.64 | +0.2 | |
1,952,938 | + | Dsui_1858 | 0.77 | -0.3 | |
1,952,938 | + | Dsui_1858 | 0.77 | -0.2 | |
1,953,048 | - | Dsui_1858 | 0.89 | -0.1 |
Or see this region's nucleotide sequence