Strain Fitness in Dechlorosoma suillum PS around Dsui_1552
Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,614,341 | + | Dsui_1551 | 0.51 | +0.3 | |
1,614,353 | + | Dsui_1551 | 0.52 | +0.2 | |
1,614,361 | - | Dsui_1551 | 0.52 | -2.0 | |
1,614,405 | - | +0.6 | |||
1,614,517 | + | Dsui_1551 | 0.61 | -0.1 | |
1,614,743 | + | Dsui_1551 | 0.73 | +0.8 | |
1,614,797 | - | Dsui_1551 | 0.76 | -2.0 | |
1,614,968 | - | Dsui_1551 | 0.85 | -0.4 | |
1,614,978 | + | Dsui_1551 | 0.86 | +0.9 | |
1,614,987 | - | Dsui_1551 | 0.86 | +0.6 | |
1,615,019 | + | Dsui_1551 | 0.88 | +0.7 | |
1,615,059 | + | -0.2 | |||
1,615,202 | + | +0.1 | |||
1,615,262 | + | -0.2 | |||
1,615,601 | + | Dsui_1552 | 0.30 | +0.6 | |
1,616,279 | - | -1.4 | |||
1,616,317 | - | Dsui_1553 | 0.15 | -1.0 | |
1,616,442 | + | Dsui_1553 | 0.48 | -1.4 | |
1,616,466 | + | Dsui_1553 | 0.55 | -1.0 | |
1,616,576 | - | +0.6 | |||
1,616,935 | - | +0.6 | |||
1,617,172 | + | Dsui_1554 | 0.17 | +0.1 | |
1,617,248 | + | Dsui_1554 | 0.20 | +0.6 | |
1,617,257 | - | Dsui_1554 | 0.20 | -0.4 |
Or see this region's nucleotide sequence