Strain Fitness in Dechlorosoma suillum PS around Dsui_1298
Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,360,918 | + | Dsui_1297 | 0.39 | +0.3 | |
1,361,279 | + | Dsui_1297 | 0.75 | +0.4 | |
1,361,290 | + | Dsui_1297 | 0.76 | -0.3 | |
1,361,355 | + | Dsui_1297 | 0.83 | +1.6 | |
1,362,487 | - | -0.2 | |||
1,362,597 | + | Dsui_1299 | 0.13 | -1.8 | |
1,362,682 | - | Dsui_1299 | 0.25 | +0.0 | |
1,362,684 | + | +0.6 | |||
1,362,701 | + | Dsui_1299 | 0.27 | -2.4 | |
1,362,709 | - | Dsui_1299 | 0.29 | -0.7 | |
1,362,720 | - | Dsui_1299 | 0.30 | -0.1 | |
1,362,746 | + | Dsui_1299 | 0.34 | -0.4 | |
1,362,812 | + | Dsui_1299 | 0.43 | +0.6 | |
1,362,904 | - | Dsui_1299 | 0.56 | +1.4 | |
1,362,919 | - | Dsui_1299 | 0.59 | -1.1 | |
1,363,052 | + | Dsui_1299 | 0.77 | -0.0 | |
1,363,061 | + | Dsui_1299 | 0.79 | -1.4 | |
1,363,072 | + | +0.6 | |||
1,363,080 | - | Dsui_1299 | 0.81 | -0.4 | |
1,363,103 | - | Dsui_1299 | 0.85 | -0.4 | |
1,363,124 | + | Dsui_1299 | 0.88 | +0.6 | |
1,363,137 | - | Dsui_1299 | 0.90 | +0.3 | |
1,363,239 | + | -0.4 | |||
1,363,239 | + | -0.4 | |||
1,363,247 | - | -0.6 | |||
1,363,247 | - | +0.6 | |||
1,363,287 | + | +0.6 | |||
1,363,288 | + | -0.4 | |||
1,363,348 | + | +0.6 | |||
1,363,418 | + | Dsui_1300 | 0.21 | -0.4 |
Or see this region's nucleotide sequence