Strain Fitness in Dechlorosoma suillum PS around Dsui_1025
Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Fusidic 0.007 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,057,377 | - | -0.8 | |||
1,057,381 | - | -0.1 | |||
1,057,595 | + | -1.1 | |||
1,057,652 | + | Dsui_1025 | 0.11 | -3.2 | |
1,057,652 | + | Dsui_1025 | 0.11 | -2.7 | |
1,057,942 | + | Dsui_1025 | 0.32 | -1.2 | |
1,057,983 | + | Dsui_1025 | 0.35 | -2.8 | |
1,058,020 | + | Dsui_1025 | 0.38 | -3.1 | |
1,058,072 | + | Dsui_1025 | 0.42 | -2.1 | |
1,058,072 | - | Dsui_1025 | 0.42 | +0.6 | |
1,058,126 | + | Dsui_1025 | 0.46 | -3.3 | |
1,058,228 | - | -1.0 | |||
1,058,291 | - | Dsui_1025 | 0.58 | -0.4 | |
1,058,317 | - | Dsui_1025 | 0.60 | +0.6 | |
1,058,343 | + | Dsui_1025 | 0.62 | -1.7 | |
1,058,379 | - | +0.6 | |||
1,058,420 | - | -1.0 | |||
1,058,426 | - | +0.6 | |||
1,058,699 | + | Dsui_1025 | 0.88 | -3.1 | |
1,058,785 | + | -2.9 | |||
1,058,800 | - | +0.6 | |||
1,058,936 | + | -3.1 | |||
1,058,959 | + | -2.9 | |||
1,059,088 | + | Dsui_1026 | 0.16 | -3.7 | |
1,059,199 | + | Dsui_1026 | 0.25 | -2.6 | |
1,059,302 | - | +0.6 | |||
1,059,479 | + | Dsui_1026 | 0.46 | -3.7 | |
1,059,533 | + | Dsui_1026 | 0.51 | -1.8 | |
1,059,534 | + | Dsui_1026 | 0.51 | -2.2 | |
1,059,693 | + | Dsui_1026 | 0.63 | -3.1 | |
1,059,780 | + | +0.6 | |||
1,059,788 | - | -0.4 | |||
1,059,810 | - | Dsui_1026 | 0.72 | -2.0 |
Or see this region's nucleotide sequence