Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0846 and Dsui_0847 overlap by 4 nucleotides Dsui_0847 and Dsui_0848 are separated by 4 nucleotides Dsui_0848 and Dsui_0849 overlap by 4 nucleotides
Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142
_0846
Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780
_0847
Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567
_0848
Dsui_0849: Dsui_0849 - ParB-like partition protein, at 866,564 to 867,397
_0849
Position (kb)
865
866 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 864.268 kb on + strand, within Dsui_0846 at 864.385 kb on - strand at 864.455 kb on + strand, within Dsui_0846 at 864.523 kb on + strand, within Dsui_0846 at 864.704 kb on + strand, within Dsui_0846 at 864.725 kb on + strand, within Dsui_0846 at 864.801 kb on + strand, within Dsui_0846 at 864.816 kb on + strand, within Dsui_0846 at 864.944 kb on + strand, within Dsui_0846 at 865.143 kb on - strand at 865.186 kb on + strand at 865.196 kb on + strand at 865.196 kb on + strand at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.224 kb on - strand, within Dsui_0847 at 865.233 kb on + strand, within Dsui_0847 at 865.275 kb on - strand, within Dsui_0847 at 865.282 kb on + strand, within Dsui_0847 at 865.291 kb on + strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.313 kb on - strand, within Dsui_0847 at 865.565 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.775 kb on + strand at 865.790 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 864,268 + Dsui_0846 0.53 +1.5 864,385 - -1.1 864,455 + Dsui_0846 0.63 +3.6 864,523 + Dsui_0846 0.67 +1.0 864,704 + Dsui_0846 0.77 +2.0 864,725 + Dsui_0846 0.78 +2.8 864,801 + Dsui_0846 0.82 +1.1 864,816 + Dsui_0846 0.83 +0.8 864,944 + Dsui_0846 0.89 +3.0 865,143 - -2.4 865,186 + +1.5 865,196 + +1.9 865,196 + +2.5 865,216 + Dsui_0847 0.12 +1.7 865,216 + Dsui_0847 0.12 +2.2 865,216 + Dsui_0847 0.12 +1.8 865,216 + Dsui_0847 0.12 +1.7 865,224 - Dsui_0847 0.13 -1.1 865,233 + Dsui_0847 0.15 +2.2 865,275 - Dsui_0847 0.21 +0.5 865,282 + Dsui_0847 0.22 +2.0 865,291 + Dsui_0847 0.24 +1.6 865,299 - Dsui_0847 0.25 -1.1 865,299 - Dsui_0847 0.25 -1.9 865,313 - Dsui_0847 0.27 +0.5 865,565 + Dsui_0847 0.66 +0.9 865,608 + Dsui_0847 0.73 +2.2 865,608 + Dsui_0847 0.73 +2.1 865,712 + Dsui_0847 0.89 +1.9 865,712 + Dsui_0847 0.89 +2.6 865,775 + -0.3 865,790 + -1.0
Or see this region's nucleotide sequence