Experiment: ALP with Fusidic 0.007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0763 and Dsui_0764 are separated by 13 nucleotides Dsui_0764 and Dsui_0765 are separated by 60 nucleotides Dsui_0765 and Dsui_0766 are separated by 317 nucleotides
Dsui_0763: Dsui_0763 - ammonium transporter, at 764,379 to 765,779
_0763
Dsui_0764: Dsui_0764 - nitrogen regulatory protein PII, at 765,793 to 766,131
_0764
Dsui_0765: Dsui_0765 - conserved hypothetical protein, proteobacterial, at 766,192 to 766,977
_0765
Dsui_0766: Dsui_0766 - hypothetical protein, at 767,295 to 767,531
_0766
Position (kb) 766
767 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 765.201 kb on + strand, within Dsui_0763 at 765.219 kb on - strand at 765.274 kb on - strand, within Dsui_0763 at 765.324 kb on + strand at 765.362 kb on + strand at 765.393 kb on + strand, within Dsui_0763 at 765.427 kb on - strand, within Dsui_0763 at 765.493 kb on - strand at 765.507 kb on + strand at 765.507 kb on + strand at 765.517 kb on + strand, within Dsui_0763 at 765.517 kb on + strand, within Dsui_0763 at 765.522 kb on + strand, within Dsui_0763 at 765.525 kb on - strand, within Dsui_0763 at 765.525 kb on - strand, within Dsui_0763 at 765.530 kb on - strand, within Dsui_0763 at 765.533 kb on + strand, within Dsui_0763 at 765.541 kb on - strand, within Dsui_0763 at 765.542 kb on - strand at 765.575 kb on + strand at 765.742 kb on + strand at 765.761 kb on - strand at 765.761 kb on - strand at 765.761 kb on - strand at 765.781 kb on + strand at 765.859 kb on + strand at 765.861 kb on - strand at 765.895 kb on + strand, within Dsui_0764 at 765.952 kb on - strand, within Dsui_0764 at 765.994 kb on + strand, within Dsui_0764 at 766.028 kb on + strand, within Dsui_0764 at 766.028 kb on + strand, within Dsui_0764 at 766.036 kb on - strand at 766.044 kb on + strand, within Dsui_0764 at 766.046 kb on + strand, within Dsui_0764 at 766.123 kb on - strand at 766.182 kb on - strand at 766.210 kb on + strand at 766.218 kb on - strand at 766.221 kb on - strand at 766.223 kb on - strand at 766.258 kb on - strand at 766.263 kb on - strand at 766.282 kb on + strand, within Dsui_0765 at 766.285 kb on - strand, within Dsui_0765 at 766.335 kb on - strand, within Dsui_0765 at 766.346 kb on + strand, within Dsui_0765 at 766.369 kb on - strand at 766.369 kb on - strand, within Dsui_0765 at 766.389 kb on - strand, within Dsui_0765 at 766.416 kb on + strand, within Dsui_0765 at 766.426 kb on - strand, within Dsui_0765 at 766.426 kb on - strand, within Dsui_0765 at 766.431 kb on - strand, within Dsui_0765 at 766.452 kb on + strand, within Dsui_0765 at 766.455 kb on - strand at 766.460 kb on - strand, within Dsui_0765 at 766.498 kb on + strand, within Dsui_0765 at 766.524 kb on + strand, within Dsui_0765 at 766.532 kb on - strand, within Dsui_0765 at 766.537 kb on + strand, within Dsui_0765 at 766.544 kb on - strand, within Dsui_0765 at 766.545 kb on - strand, within Dsui_0765 at 766.565 kb on + strand, within Dsui_0765 at 766.573 kb on + strand, within Dsui_0765 at 766.575 kb on + strand, within Dsui_0765 at 766.575 kb on + strand, within Dsui_0765 at 766.589 kb on + strand at 766.594 kb on + strand, within Dsui_0765 at 766.597 kb on - strand, within Dsui_0765 at 766.740 kb on + strand, within Dsui_0765 at 766.757 kb on - strand, within Dsui_0765 at 766.784 kb on - strand, within Dsui_0765 at 766.825 kb on - strand, within Dsui_0765 at 766.841 kb on - strand, within Dsui_0765 at 766.841 kb on - strand, within Dsui_0765 at 766.874 kb on - strand, within Dsui_0765 at 766.912 kb on + strand at 766.930 kb on - strand at 766.941 kb on - strand at 766.947 kb on + strand at 766.947 kb on + strand at 766.965 kb on - strand at 766.986 kb on + strand at 767.012 kb on + strand at 767.020 kb on - strand at 767.033 kb on - strand at 767.082 kb on + strand at 767.090 kb on - strand at 767.090 kb on - strand at 767.090 kb on - strand at 767.091 kb on - strand at 767.115 kb on - strand at 767.149 kb on + strand at 767.149 kb on + strand at 767.152 kb on - strand at 767.157 kb on - strand at 767.251 kb on - strand at 767.278 kb on + strand at 767.286 kb on - strand at 767.302 kb on + strand at 767.413 kb on + strand, within Dsui_0766 at 767.445 kb on + strand, within Dsui_0766 at 767.445 kb on + strand, within Dsui_0766 at 767.450 kb on + strand, within Dsui_0766 at 767.457 kb on + strand, within Dsui_0766 at 767.481 kb on + strand, within Dsui_0766 at 767.517 kb on + strand at 767.591 kb on - strand at 767.606 kb on + strand at 767.614 kb on + strand at 767.772 kb on + strand at 767.818 kb on + strand at 767.820 kb on - strand at 767.826 kb on - strand at 767.832 kb on + strand at 767.932 kb on - strand at 767.953 kb on - strand at 767.953 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Fusidic 0.007 mg/ml remove 765,201 + Dsui_0763 0.59 +0.5 765,219 - +0.5 765,274 - Dsui_0763 0.64 -0.5 765,324 + -0.5 765,362 + +0.5 765,393 + Dsui_0763 0.72 +0.5 765,427 - Dsui_0763 0.75 +0.5 765,493 - +0.5 765,507 + +0.5 765,507 + +0.5 765,517 + Dsui_0763 0.81 -1.5 765,517 + Dsui_0763 0.81 -0.5 765,522 + Dsui_0763 0.82 +0.4 765,525 - Dsui_0763 0.82 -3.4 765,525 - Dsui_0763 0.82 -1.1 765,530 - Dsui_0763 0.82 -0.6 765,533 + Dsui_0763 0.82 -2.1 765,541 - Dsui_0763 0.83 +0.4 765,542 - +0.4 765,575 + +0.4 765,742 + -1.9 765,761 - -2.3 765,761 - +0.4 765,761 - -1.6 765,781 + -2.1 765,859 + +0.4 765,861 - +0.4 765,895 + Dsui_0764 0.30 -1.9 765,952 - Dsui_0764 0.47 +0.4 765,994 + Dsui_0764 0.59 -1.6 766,028 + Dsui_0764 0.69 +0.4 766,028 + Dsui_0764 0.69 -2.0 766,036 - +0.4 766,044 + Dsui_0764 0.74 +0.4 766,046 + Dsui_0764 0.75 +0.4 766,123 - -2.9 766,182 - -1.1 766,210 + +0.4 766,218 - -1.1 766,221 - -1.1 766,223 - +0.4 766,258 - +0.4 766,263 - +0.4 766,282 + Dsui_0765 0.11 -1.6 766,285 - Dsui_0765 0.12 +0.4 766,335 - Dsui_0765 0.18 -2.7 766,346 + Dsui_0765 0.20 -1.1 766,369 - +0.4 766,369 - Dsui_0765 0.23 -2.1 766,389 - Dsui_0765 0.25 -1.1 766,416 + Dsui_0765 0.28 -1.6 766,426 - Dsui_0765 0.30 -0.6 766,426 - Dsui_0765 0.30 -1.9 766,431 - Dsui_0765 0.30 -3.6 766,452 + Dsui_0765 0.33 -1.1 766,455 - +0.4 766,460 - Dsui_0765 0.34 -2.1 766,498 + Dsui_0765 0.39 -0.6 766,524 + Dsui_0765 0.42 +0.4 766,532 - Dsui_0765 0.43 -0.6 766,537 + Dsui_0765 0.44 +0.4 766,544 - Dsui_0765 0.45 -1.1 766,545 - Dsui_0765 0.45 -1.9 766,565 + Dsui_0765 0.47 -2.7 766,573 + Dsui_0765 0.48 -1.1 766,575 + Dsui_0765 0.49 -2.1 766,575 + Dsui_0765 0.49 -1.9 766,589 + +0.4 766,594 + Dsui_0765 0.51 -0.6 766,597 - Dsui_0765 0.52 -3.4 766,740 + Dsui_0765 0.70 +0.4 766,757 - Dsui_0765 0.72 +0.4 766,784 - Dsui_0765 0.75 -0.6 766,825 - Dsui_0765 0.81 +0.4 766,841 - Dsui_0765 0.83 -1.9 766,841 - Dsui_0765 0.83 +0.4 766,874 - Dsui_0765 0.87 -1.6 766,912 + -1.9 766,930 - -2.9 766,941 - +0.4 766,947 + -0.6 766,947 + -2.4 766,965 - -1.6 766,986 + +0.4 767,012 + +0.4 767,020 - -0.6 767,033 - -2.1 767,082 + +0.4 767,090 - +0.4 767,090 - +0.4 767,090 - -0.6 767,091 - -1.1 767,115 - -1.6 767,149 + -1.9 767,149 + +0.4 767,152 - +1.4 767,157 - +0.4 767,251 - -0.6 767,278 + +1.9 767,286 - -1.6 767,302 + +0.5 767,413 + Dsui_0766 0.50 +0.8 767,445 + Dsui_0766 0.63 +1.7 767,445 + Dsui_0766 0.63 +0.7 767,450 + Dsui_0766 0.65 +1.4 767,457 + Dsui_0766 0.68 +1.0 767,481 + Dsui_0766 0.78 +0.6 767,517 + +0.8 767,591 - +0.4 767,606 + -0.2 767,614 + -0.2 767,772 + -0.3 767,818 + -0.3 767,820 - +0.4 767,826 - +0.4 767,832 + -0.4 767,932 - -2.1 767,953 - -0.6 767,953 - +0.4
Or see this region's nucleotide sequence